LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo11g0234	ATGATGTGTGGAAGAATTTGTAAACGAGTTGAAATGAATAAACAAGCACTCAATTATAAATTCATGTCTAATGGTTCTTTGCATAAATTTACATATAAACAGAGATCTTCCTATCTCATTTCTAATTTAGATTGGAACTACTCACATCGAAGATATAATACGAAAATTTTGCATCTTGATATCAAACCCCAAAATATTCCTCTTGATGAGAATTTTTGTCCAAAAATTACAGATTTTGGATTAGCTAAAATATACAAAAAGAATGAAAATATTGTGTCTATGTTGGGTACAAGAGGGATTCCAGAGTATATTGCACCAGAAATGATTAGTCGAATTTATAGTGGAGTTTCTCACAAATCGAATATGCACAGTTATGGAATCTTAATTCTTGAAATGATTGGAGAAAAAAAGAATTATGATACTGAAAAATCTCATGGCAGTGAATTGTACTTTTTTGATTGGATTTATACGAATTTTGAGGAAAGTAATATTCACACAAGGAGTTTAGTATCAGGAGAAGAAGAAAAATGA	531	0.2957	MMCGRICKRVEMNKQALNYKFMSNGSLHKFTYKQRSSYLISNLDWNYSHRRYNTKILHLDIKPQNIPLDENFCPKITDFGLAKIYKKNENIVSMLGTRGIPEYIAPEMISRIYSGVSHKSNMHSYGILILEMIGEKKNYDTEKSHGSELYFFDWIYTNFEESNIHTRSLVSGEEEK*	177

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo11g0234	176	Pfam	Protein kinase domain	28	145	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo11g0234	176	Gene3D	Transferase(Phosphotransferase) domain 1	22	173	-	-
	Amo11g0234	176	PANTHER	TYROSINE KINASE FAMILY PROTEIN	11	175	-	-
	Amo11g0234	176	ProSiteProfiles	Protein kinase domain profile.	1	176	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo11g0234	176	SUPERFAMILY	Protein kinase-like (PK-like)	14	151	IPR011009	-
	Amo11g0234	176	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	11	175	IPR045874	GO:0004672

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo11g0234	Amo-Chr11	3507339	3507954	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo11g0234	11	176	Receptor kinase-like Gene Family	AT1G66980	43.784	3.58e-45	156

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Amo11g0234		Pkinase	6.4e-20	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo11g0234	-		-	ahf:112729553	207.223