Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0233 ATGTATAAAGTGGTAGAAATGTTAGAAGGAATACCTCAATTAGTACCATGTTCTCTGAAGCATGTCATGTCTTTTTCTACAAGACTTCCCTTACAGTATTCAGATGCATGTTATAGTTATCAAGTTGAGGAGTTAATAAAAAGTTATGGTACTGCAACTCCAGCTAGATATAATTATAAAAAATTAGGACAAGGGGTATATGGTATTGTATACAAAGCAAGTTTAAATCATGGTCGTCAAGTGACAGTAAAGGTACTTAAAAAATTGGGTGCACCATATCAACTCACAATTAGTGTTGCTCGAGGATTAGACTACTTATATCGAGGATGTAATACAAGAATTTTTCATCTATATATTAAAGCCCAAAATAATCCTCTTGATGAGAACTTTTGCCCAAAAATTACAGATTTGGGATTAACTAAAATATACAAAAAGAATGAAAGTATTGTGTCTATATTGGGTACAAAAGAGACTCCAGTTTCTCGCAAATCAGACATGTACAGTTATGGAATGTTAATTCTTAAAATAATTGGAAAAAAATATTATGATACTAAAAAATCTCATAGTAGTGAATTGTACTATCTTGGTGGAATTTTGAGGAAAGTAATTTTAATACAAGGAGTTTGGTATCAGGAGAAGCAGAAAATCATTTTAGTAGATATTGTTTTGTTTAGTTGTTTCGATAGTCAAGTTGAGGAGCTAATAAAAAGTTATGATACTGCAACTCTACCGAGATATAATTATACCGAAGCAAAAAAATGA 762 0.3084 MYKVVEMLEGIPQLVPCSLKHVMSFSTRLPLQYSDACYSYQVEELIKSYGTATPARYNYKKLGQGVYGIVYKASLNHGRQVTVKVLKKLGAPYQLTISVARGLDYLYRGCNTRIFHLYIKAQNNPLDENFCPKITDLGLTKIYKKNESIVSILGTKETPVSRKSDMYSYGMLILKIIGKKYYDTKKSHSSELYYLGGILRKVILIQGVWYQEKQKIILVDIVLFSCFDSQVEELIKSYDTATLPRYNYTEAKK* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0233 253 Gene3D Transferase(Phosphotransferase) domain 1 88 223 - -
Amo11g0233 253 Pfam Protein kinase domain 96 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0233 253 PANTHER RUST RESISTANCE KINASE LR10-RELATED 93 201 IPR045874 GO:0004672
Amo11g0233 253 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0233 253 PANTHER TYROSINE KINASE FAMILY PROTEIN 93 201 - -
Amo11g0233 253 PANTHER TYROSINE KINASE FAMILY PROTEIN 60 88 - -
Amo11g0233 253 SUPERFAMILY Protein kinase-like (PK-like) 46 236 IPR011009 -
Amo11g0233 253 PANTHER RUST RESISTANCE KINASE LR10-RELATED 60 88 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0233 Amo-Chr11 3505701 3507232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0233 29 194 Receptor kinase-like Gene Family AT1G66930 34.419 4.44e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo11g0233 Pkinase 1.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0233 - - aip:107637469 134.42