Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0230 ATGGCGCATCCAAATAAATCCATCAAATTGACCATTAATTACCTTGTCCTCCGAAGCCTGTCATGTCTTCCCCTACAAGACCTCTCTAGTAGTATTCAGATGCATCTCATAGTTGTAGAATATGGAATTGTACATAAAACAAGTTTAAATGATGGTTGTCAAGTGGTCATAAAGGTACTTAAGGAGTCAAAAGGAAGTGTGGAAGAATTTGTAAACGAGGTTGTTACTATTAGTAGAAAATCTCATGTGAAAATTGTTTCACTTTTGGGATTTTGTTATGAAATGAATAAACAGACACTCATTTATGAATTCATGTCTAATGATTTGAGCACACTATATCAGATTATAATTATTAGTGTTGCTCGAGGAGTAGACTAG 378 0.3413 MAHPNKSIKLTINYLVLRSLSCLPLQDLSSSIQMHLIVVEYGIVHKTSLNDGCQVVIKVLKESKGSVEEFVNEVVTISRKSHVKIVSLLGFCYEMNKQTLIYEFMSNDLSTLYQIIIISVARGVD* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0230 125 PANTHER TYROSINE KINASE FAMILY PROTEIN 22 107 - -
Amo11g0230 125 Gene3D Phosphorylase Kinase; domain 1 39 106 - -
Amo11g0230 125 PANTHER RUST RESISTANCE KINASE LR10-RELATED 22 107 IPR045874 GO:0004672
Amo11g0230 125 Pfam Protein tyrosine and serine/threonine kinase 40 107 IPR001245 GO:0004672|GO:0006468
Amo11g0230 125 SUPERFAMILY Protein kinase-like (PK-like) 41 121 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0230 Amo-Chr11 3502025 3502957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0230 41 125 Receptor kinase-like Gene Family AT1G66980 46.000 1.29e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo11g0230 PK_Tyr_Ser-Thr 2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0230 - - aip:107636243 118.627