LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo11g0207	ATGATTGAAATTGAGACACTTCCTCTACTCTATACTCTTATTGCTTTGTTATTCGCATATTTACTTTGGTTCCACCTTTTCTCTCGAACCCTAACCGGTCCGAGAGTGTATCCTTTCCTTGGAAGCCTTCCAATCCTTTTCATGAATCGAAATCGGGTTCATGATTGGATTACCCTAAATTTAATAGGCCGAATCAAAGTTTCTGGTTCGGCCACATACCAGACTTGTATCCTCCCTTTTCCTTTCTTGGCACGTAAGCAAGGGTTTTACACAGTCACGTCCAATCCCAAGAACATCGAGCACGTGCTCAAAGTCAGATTTGATAATTACCCGAAAGGGCCCAACTGGCAAACAGCATTCCATGATCTCTTGGGCCAAGGGATCTTCAACAGCGACGGTGCCACGTGGCTGATTCAGCGCAAGACGGCGGCTTTGGAGTTCACGACGCGAACCCTAAAGCATGCCATGAGCCGATGGGTGAACCGTACAATCAAGAACCGGTTGTGGTGCATCTTGGATAAAGCAGCAAAGGAGGGTGTAGCGGTGGACCTTCAGGACCTTCTTCTCAGGTTGACTTTTGATAACATTTGTGGACTCACGTTTGGGAAGGACCCAGAAACTTTGTCACCGGATTTGCCTGAAAACCCTTTCTGCAATGCCTTTGATTCTGCAACTGAAGCTACGTTGCATAGGCTTTTGTATTACCCTGGGATCTTGTGGAGGTTCAAGAAGCTTCTATGCATTGGTTCCGAAAAGAGGCTCATGGACAGTTTGAAGGTCGTTGACGATTACATGAACGTCGTCGTCTCCAATCGTGACAAGTCATCCTCCGACGACCTAATCTCCCGCTTCACCAGCAAGCGTGACGGCGATGGCAACCCCTTCTCCGCCGCCGCACTCCAACGCATCGCCCTCAACTTCGTCCTCGCCGGCAGGGACACCTCCTCCGTCGCCCTCTCCTGGTTCTTCCACCTCGTCTCCTCCCACCCCGCCGTCGAGGATCGCATCCTCCGCGAGCTTACGGCGGTCCTCTCCGCCTCTCGCGGCTCGGATCGCTGTCGCTGGACGGAGAATGCTATCGACTTCGAGGAGGCGGAGAAGCTCGTTTACCTCAAAGCCGCACTCTCTGAAACGCTGCGTTTATACCCTTCAGTTCCCGAGGATTTTAAGTACGCATTAAACGACGACGTTTTGCCAGATGGCACCTTCGTTCCGAAGGGTTCGACGGTTACTTATTCGATTTACTCTGTTGGGAGAATGAAGAGTGTTTGGGGTGAGGATTGCATGGAATTTAAACCGGAGCGTTGGATTTCGGTTCAGGAGAACCGGGTTCGATTCGAACAGCCAAAAGATGGGTTTAAGTTCGTTGCTTTTAATGCTGGACCGAGAACCTGCTTGGGCAAGGACTTGGCTTACCTTCAGATGAAGTCTGTGGCTGCGGCTGTGCTTTTGAGGTACCGGATATTGCCGGTTCCCGGTCACAAGGTCGAGCAGAAGATGTCGCTTACGCTGTTCATGAAGAATGGGCTCCGTGTTTACTTACAGCCGCGTCAGCTTCTACCAGAGAATGCCATGTACGCATAG	1584	0.5076	MIEIETLPLLYTLIALLFAYLLWFHLFSRTLTGPRVYPFLGSLPILFMNRNRVHDWITLNLIGRIKVSGSATYQTCILPFPFLARKQGFYTVTSNPKNIEHVLKVRFDNYPKGPNWQTAFHDLLGQGIFNSDGATWLIQRKTAALEFTTRTLKHAMSRWVNRTIKNRLWCILDKAAKEGVAVDLQDLLLRLTFDNICGLTFGKDPETLSPDLPENPFCNAFDSATEATLHRLLYYPGILWRFKKLLCIGSEKRLMDSLKVVDDYMNVVVSNRDKSSSDDLISRFTSKRDGDGNPFSAAALQRIALNFVLAGRDTSSVALSWFFHLVSSHPAVEDRILRELTAVLSASRGSDRCRWTENAIDFEEAEKLVYLKAALSETLRLYPSVPEDFKYALNDDVLPDGTFVPKGSTVTYSIYSVGRMKSVWGEDCMEFKPERWISVQENRVRFEQPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRILPVPGHKVEQKMSLTLFMKNGLRVYLQPRQLLPENAMYA*	528

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Amo11g0207	527	PANTHER	CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE	5	519	-	-
Amo11g0207	527	Pfam	Cytochrome P450	91	507	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Amo11g0207	527	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	458	467	IPR017972	GO:0005506\|GO:0016705
Amo11g0207	527	Gene3D	Cytochrome P450	29	524	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Amo11g0207	527	PRINTS	P450 superfamily signature	310	327	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Amo11g0207	527	PRINTS	P450 superfamily signature	373	384	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Amo11g0207	527	PRINTS	P450 superfamily signature	456	465	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Amo11g0207	527	PRINTS	P450 superfamily signature	465	476	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Amo11g0207	527	PANTHER	CYTOCHROME P450	5	519	-	-
Amo11g0207	527	PRINTS	E-class P450 group I signature	299	316	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo11g0207	Amo-Chr11	3113779	3115441	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo11g0207	14	517	Cytochrome P450	AT5G58860	70.238	0.0	738

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo11g0207	K15401		-	gmx:100788343	800.816

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo11g0207	11	3113779	3115441	Amo11g0207	11	3113779	3115441	ECH

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