Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0188 ATGCAAACTGGCTTGGCAATGATATGTGCTGGATCCGTACGTGCCGAGAATGCCATGAACATAATGCTAAACAATGTGGTTGATGCTGTGGTTGGTAGCATCTCATTCTACCTTTTTGGATTTGCATTTGCATATGGAAATTCGAATCCTTTCATTGGAACTAATTTGTGTGCTCTAGCCAACATTCCAAATGGCACATATGATTATATGGGTTTGTGTACCCAGGTGTGGCCCATTGGGTTTGGTCATCCAGTGGTTGGCCAAGTCCAAGGTCAAGTGAGCTGTTCTTGGGCTCAGGAGCCATTGACTTTGCTGGGAGTGAGAGTGGTCCATATGGTTGGTGCCATTGCGGGCTTTTGGGGATCCATCATAGAAGGCCCACACGTCGGCCGATTTGATGCTTTTGGCAAGCCGGTCCCTCTTCAAGGCCATAATGCAACTCTTGTGATAACTAGACTTCAGTTGGTCAAACTGCTATTGTCACCACATTGGCCGGATCGACGGCTAGCACCGTCACCTTGTTCGGGCGACGATTATTAA 540 0.4759 MQTGLAMICAGSVRAENAMNIMLNNVVDAVVGSISFYLFGFAFAYGNSNPFIGTNLCALANIPNGTYDYMGLCTQVWPIGFGHPVVGQVQGQVSCSWAQEPLTLLGVRVVHMVGAIAGFWGSIIEGPHVGRFDAFGKPVPLQGHNATLVITRLQLVKLLLSPHWPDRRLAPSPCSGDDY* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0188 179 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 104 151 - -
Amo11g0188 179 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 1 93 - -
Amo11g0188 179 PANTHER AMMONIUM TRANSPORTER 104 151 - -
Amo11g0188 179 PANTHER AMMONIUM TRANSPORTER 1 93 - -
Amo11g0188 179 Pfam Ammonium Transporter Family 108 150 IPR024041 GO:0008519|GO:0016020|GO:0072488
Amo11g0188 179 Pfam Ammonium Transporter Family 1 75 IPR024041 GO:0008519|GO:0016020|GO:0072488
Amo11g0188 179 Gene3D Ammonium transporter AmtB like domains 102 155 IPR029020 -
Amo11g0188 179 Gene3D Ammonium transporter AmtB like domains 1 78 IPR029020 -
Amo11g0188 179 SUPERFAMILY Ammonium transporter 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0188 Amo-Chr11 2808562 2809435 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0188 1 150 Inorganic Solute Cotransporters AT4G13510 40.838 3.57e-35 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0188 K03320 - pvy:116129597 166.392