Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0187 ATGAACTATGATGACCCATTAGAGGCAGCCCGATTGCACTTAGGGCTTCTTGTTTACAGGGTTATTTGCCAAAGAAAAATTTGTGATCCAAGCATACAATTCAGGTGCCACAAGAGTGGTAAGACCTTATGGTCTAATACTTGGAGTGCAACAATGTGGCCCATGTTCTATGCCTTGAACAAGCTTAAATTGCTGAGAATCTCCATTGGTGAGGAAGTTTTAGGCCTTGATATCTCCAGACATGGAGGGTATGCTTATGCTCATGATCATGCTCATCAAGAGAATAATGATCCTCGTTCTCATGCAGATTATATGCATATTCAAGATGACCAATCAAAGTTTGATTTTATGATTCTACTAGTTTTAGGAATTGCCCTATAG 381 0.3963 MNYDDPLEAARLHLGLLVYRVICQRKICDPSIQFRCHKSGKTLWSNTWSATMWPMFYALNKLKLLRISIGEEVLGLDISRHGGYAYAHDHAHQENNDPRSHADYMHIQDDQSKFDFMILLVLGIAL* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0187 126 Gene3D Ammonium transporter AmtB like domains 1 94 IPR029020 -
Amo11g0187 126 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 49 109 - -
Amo11g0187 126 PANTHER AMMONIUM TRANSPORTER 49 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0187 Amo-Chr11 2807980 2808420 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0187 1 101 Inorganic Solute Cotransporters AT1G64780 35.537 6.14e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0187 K03320 - jre:109009016 88.5817