Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0186 ATGATATGTGCTGGATCCGTACGTGCCAAAAATGCCATGAACATAATGCTAACCAAGGTGTTGCCCATTGGGTTTGTTCATCCAGTGGTTGGCCAAGTCCAAGGTCAAGTGAGCTGTTCTTGGGCTCAGGAGCCATTGACTTTGCTGGGAGTGAGAGTGGTCCATATGGTTGGTGCCATTGCAGGCTTAAACATCTTCAAATTAAAAATGAACTATGATGACCCATTAGAGGCAGCCCGATTGCATGGTGGGTGTGGCACTTGGGGCTTCTTGTTTACAGGGCTGTTTGCCAAAGAAGAATTTGTGATCCAAGCCTGCAATTCAGGTTCCACAGGAGTGGTAAGACCTTATTGTCTAATACTTGGAGGTGGATTTGGATTGATTGGAGCCCAAATTGTTGAGATTTTTGTAATCTTTGTATGGGTTAGTGCAACAATCTGGCCCATGTTCTATGCCTTGAACAAGCTTAAATTGCTGAGAATCTCCATTGATGAGGAAGTTTTAGGCCTTGATATCTCAAGCCATGGAGGGTATGCTTATGCTCATGATCATGCTCATCAAGAGAATAATGATCCTCGTTCTCATGCAGATTATATGCATATTCAAGATGACCAATCAAAGTTTGATTTTATGATTCTAGGGTGA 645 0.4295 MICAGSVRAKNAMNIMLTKVLPIGFVHPVVGQVQGQVSCSWAQEPLTLLGVRVVHMVGAIAGLNIFKLKMNYDDPLEAARLHGGCGTWGFLFTGLFAKEEFVIQACNSGSTGVVRPYCLILGGGFGLIGAQIVEIFVIFVWVSATIWPMFYALNKLKLLRISIDEEVLGLDISSHGGYAYAHDHAHQENNDPRSHADYMHIQDDQSKFDFMILG* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0186 214 Gene3D Ammonium transporter AmtB like domains 53 197 IPR029020 -
Amo11g0186 214 PANTHER AMMONIUM TRANSPORTER 1 22 - -
Amo11g0186 214 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 1 22 - -
Amo11g0186 214 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 60 203 - -
Amo11g0186 214 PANTHER AMMONIUM TRANSPORTER 60 203 - -
Amo11g0186 214 Pfam Ammonium Transporter Family 47 180 IPR024041 GO:0008519|GO:0016020|GO:0072488
Amo11g0186 214 SUPERFAMILY Ammonium transporter 30 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0186 Amo-Chr11 2786247 2787582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0186 62 195 Inorganic Solute Cotransporters AT1G64780 50.746 1.81e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0186 K03320 - jre:118344481 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0186 11 2786247 2787582 Amo11g0186 11 2786247 2787582 ECH