Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0168 ATGATGAAGACAACACCACCACCCTCTTATTCTTACCACACACACTCCTTCTTTTTCTTAACCGTCATTCTCATCATAACCGCCGCAAATGCCATCGGCTCCGCATCCACCACCGCCGTCATCTACGCCTCATCCACAGTCTGCGCCATCGTTGCCGGCGACGTCAAACAATACATCCACTGCTACCAACAAAACCAGCACAAGAATTCTCATTATTATTATTATGGAGATGTTGCACCGGTGGATGAGGTGGTTCCACACGTGTCCTTTGAATCCATCTCCGGCGGTCGGAGCTTCTTCTGCGGTCTCCGGTCCGGTGGACTCAGCCTCCTTTGCTGGGACGTGGACGGCGGAGCATCGGTATTGGTGCCGAAGAGGATCTTCCACAGTGACGTGGTGCAGTTAACTGATCTAACTGTTGGTGATTCTCAGGTTTGTGCTAGAGAGTCTCAGTCTGGTGTGGTAAGGTGTTGGAGAGGAGGCCGCATTGAAAATGGATTCAAGTTTTATTCACCTGGTAAGGACCTTAGGTTCAAAAGCATCACTTCAGGGTCTGGTTTCTCTTGTGGGGTGTTAATGGATAATGGAAAGGTTCATTGTTGGGGTAACAATATTAGTAGTAAAATTCAAGCACAATTTGATAACATTTCTATGTCAAAGGTGGTTGCTGGAGTGTCACATGTTTGTGGCTTAACAATCTATGATGAGTACTTAATTTGCAAAGGGAACAATGATTCCGGCCAATTGGGTCTTAATTTAAATTCAAGTTCTTATTATTCAGAGTTTTCAGAACTTGCATTGGGAGAAGATTTCACTTGTGGTATTAGAAGAAAAAATGGATTTGTCCTATGTTGGGGTGGTGCTGAAGATACCAAAAAGTTTGATTTGTTTAATAATGTTTCTTTTGAGTCAATTGTAGCTGGTTTGGATTTTGTTTGTGGGGTAACAACTATAAATTTGTCTTTGATTTGTTGGGGTCCTGGTTGGTCTAATAATAATGGTACTAATTATGAGATTCCATTGGGAATTGTTCTTCCTAGTCCATGTGTTAGAGGTGGTTGTGATTCTTCTTGTGCTTCATATCCAAATTCTGACTATTTGTGTCATGGTTCTGGAACTATTTGCTATTCATGTCAGGATAGTCAAATTCCACTAGTCGTGCCATTGATTTTACCACCACCACTATCATCGTCAACACAAGTTTCTAATGTTCATCACAAAAACATGAGGGTGATTTTGGTCATTTTGATTGTTGGATCAATTGGTGCTTTCTCTGGTTTATGCACTATTCTTTATTTCCTTTGGATTGGAGCTAAAAGACTATTCTTGAAGAAGAGAGATGTTGGTAATTCAGAACAACCTCAAAGAAGTGATGATTCTGATGATGATGCCTATATTGAATTGGCTCCAATGTCAGCGAATCGCGCATCGAATGCAGCATTAGGATCACTGAGGAGACATAGGAGTGTTGGTAGTTCATCATCATCAAAGCATAATTTGGATAAGATTGAGAATTTTTCATTACATGAATTAGTCATAGCCACTAACAATTTTTCAAATGATAACAAGATAGGTTCTGGAAGCTTTGGCTCTGTATACAAAGGGAAGCTAGCCGATGATCGCAAAGTTGCCATCAAAAGAGGAGATATTGTTTCTAGCACAAAGAAGAAATTCCAAGAGAAGGAGATTGCATTTGATTCAGAGTTGTCATTGTTATCGCGGCTTCATCACAAGCATCTTGTGAGACTAATAGGTTTCTGCGAGGAGAATGAAGAGAGGCTCTTGGTTTATGAGTACATGAGCAATGGATCAATCCATGAACATTTACATAACAAGAATAATGTTGAGAAAAATAGTAGCATTTTGAATTCTTGGAAGATGAGGATCAAAATTGCATTGGATGCTGCCAGGGGAATTGAGTACATTCACAACTACGCTGTTCCACCAATTATCCATAGAGATATCAAATCGTCAAATATACTATTGGACTCAAATTGGAATGCTAAGGTTTCTGATTTCGGATTGTCCCTTATTTGGCCGGAGATAGAACAAGATTCGACTTCTATAAAGGCGGTTGGCACAGTTGGTTACATAGATCCGGAATACTATGAATTGAATGTGTTAACAACAAAAAGTGATGTGTATGGTTTAGGAGTGGTTATGTTGGAGCTTCTAACAGGAAAAAGAGTTGTTTTCAAATTAGGTGATGAGAGTAGTCTTGTGGGAATCGTAGAATATGCAAGGCCAAGAATAGCAAAAGGGGAATTATGGAGTATTTTGGATTATAGAATTGAAAAACCTAATGTTAATGAGGTTGAGGCTCTTAAGATTATGACTTTCATTACTATGCATTGTGTGAATTTGGAGGGAAAAGAAAGGCCAGAAATGGCTGAAGTTGTTGCCAACTTAGAAAGGGCATTGGCTTTTTTGGAGGCTAGGATGATAATTAGGAGAATAAGTTAG 2463 0.3983 MMKTTPPPSYSYHTHSFFFLTVILIITAANAIGSASTTAVIYASSTVCAIVAGDVKQYIHCYQQNQHKNSHYYYYGDVAPVDEVVPHVSFESISGGRSFFCGLRSGGLSLLCWDVDGGASVLVPKRIFHSDVVQLTDLTVGDSQVCARESQSGVVRCWRGGRIENGFKFYSPGKDLRFKSITSGSGFSCGVLMDNGKVHCWGNNISSKIQAQFDNISMSKVVAGVSHVCGLTIYDEYLICKGNNDSGQLGLNLNSSSYYSEFSELALGEDFTCGIRRKNGFVLCWGGAEDTKKFDLFNNVSFESIVAGLDFVCGVTTINLSLICWGPGWSNNNGTNYEIPLGIVLPSPCVRGGCDSSCASYPNSDYLCHGSGTICYSCQDSQIPLVVPLILPPPLSSSTQVSNVHHKNMRVILVILIVGSIGAFSGLCTILYFLWIGAKRLFLKKRDVGNSEQPQRSDDSDDDAYIELAPMSANRASNAALGSLRRHRSVGSSSSSKHNLDKIENFSLHELVIATNNFSNDNKIGSGSFGSVYKGKLADDRKVAIKRGDIVSSTKKKFQEKEIAFDSELSLLSRLHHKHLVRLIGFCEENEERLLVYEYMSNGSIHEHLHNKNNVEKNSSILNSWKMRIKIALDAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNAKVSDFGLSLIWPEIEQDSTSIKAVGTVGYIDPEYYELNVLTTKSDVYGLGVVMLELLTGKRVVFKLGDESSLVGIVEYARPRIAKGELWSILDYRIEKPNVNEVEALKIMTFITMHCVNLEGKERPEMAEVVANLERALAFLEARMIIRRIS* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0168 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Amo11g0168 820 ProSiteProfiles Protein kinase domain profile. 518 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0168 820 Gene3D Phosphorylase Kinase; domain 1 489 599 - -
Amo11g0168 820 SMART serkin_6 518 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0168 820 Pfam Protein kinase domain 519 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0168 820 Gene3D Transferase(Phosphotransferase) domain 1 600 814 - -
Amo11g0168 820 CDD STKc_IRAK 524 805 - -
Amo11g0168 820 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 16 814 - -
Amo11g0168 820 Pfam Regulator of chromosome condensation (RCC1) repeat 179 204 - -
Amo11g0168 820 Gene3D - 29 294 IPR009091 -
Amo11g0168 820 SUPERFAMILY RCC1/BLIP-II 81 390 IPR009091 -
Amo11g0168 820 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Amo11g0168 820 SUPERFAMILY Protein kinase-like (PK-like) 493 803 IPR011009 -
Amo11g0168 820 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 16 814 IPR044815 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0168 Amo-Chr11 2562206 2567280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0168 20 807 Receptor kinase-like Gene Family AT3G55950 48.230 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Amo11g0168 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0168 - - gmx:100802403 903.279