Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0133 ATGAACACTTTGAGTCAAATATTCCAAAACATGTTCTCAGACAACAGCAACATAATGCTTGCAGCCATAATATCTTTGCTCCTTGTAATCCTCTTTGTCCTTCTCCTCCATCTCTATGCTAAATGGTTCCTAGCTCAGGCTCAGGCTCAGGCAAATGCTCGCCGCCGTCGTCGTCGCCGCCGCAGAGCAGCCACAGTAACCGTTTCTGATGTTCTTGGCCCTGCAAGGTTCCACCACTTCCACAGCTTCAACATAGAAGATTCACCAATATTCCCATCATCATCAAGTTCTCATCACAATACATCAAAAGGGTTAGATTCTTCTGTCATTGCAAGAATTCCTCTTTTCATTTATACTACTACTAATTCAGAAGCATTGAAAGGTAGTGAAGAAGTTGAGAATAGTGATGAGCTTGAGTGTGTGATTTGTTTGAGTTCTTTTGAAGATGGAGAGATGGGAAGGTGTTTACCAAAATGTGGACATGGTTTTCATGTTGATTGCATTGATATGTGGCTGAATTCTCATTCAAATTGTCCAATTTGCAGGGCTCCAATAATTCTTAGTAGTGGGATTGTTGTTGAGAATGATAATTCCCAATTAGGTTCTGTTATTGATGATGGGGGTGATCATAATGATCATGATCATGATCATGTTCATGTTCATAATGTTGATGATGGTAGTGGTGCCTCTGCTTTAGTTGAGATTGTGGTTGATGATTTTGGTCAAAGTTCTGAAATTAGAGAGAATAATGAAAATGGAGAAAGAGTGAGTAGTAGCAGTGATTCTTCTGTCTCAGAAACAGAAACCTCAACATCTTTGGTAATTGTTGGTTGTTCTTTGAAGAGAATGTTGAGCAAAGTTTTTCCATCTTCTAATAATGCAAATGTAAATGAATTACAAACTTAG 906 0.3874 MNTLSQIFQNMFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAQAQANARRRRRRRRRAATVTVSDVLGPARFHHFHSFNIEDSPIFPSSSSSHHNTSKGLDSSVIARIPLFIYTTTNSEALKGSEEVENSDELECVICLSSFEDGEMGRCLPKCGHGFHVDCIDMWLNSHSNCPICRAPIILSSGIVVENDNSQLGSVIDDGGDHNDHDHDHVHVHNVDDGSGASALVEIVVDDFGQSSEIRENNENGERVSSSSDSSVSETETSTSLVIVGCSLKRMLSKVFPSSNNANVNELQT* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0133 301 CDD RING-H2_EL5_like 139 182 - -
Amo11g0133 301 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Amo11g0133 301 PANTHER - 2 295 - -
Amo11g0133 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 186 IPR013083 -
Amo11g0133 301 SMART ring_2 140 181 IPR001841 -
Amo11g0133 301 SUPERFAMILY RING/U-box 130 188 - -
Amo11g0133 301 MobiDBLite consensus disorder prediction 243 266 - -
Amo11g0133 301 Pfam Ring finger domain 139 182 IPR001841 -
Amo11g0133 301 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 295 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0133 Amo-Chr11 1877452 1878598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0133 12 191 Rapid Response to Elicitors AT3G16720 37.778 4.09e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0133 - - adu:107473099 478.789