Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0122 ATGGCAAATCATCATAAGAGAACCCTAAAGTTTGACATTAAACAAATTGTTTATGTGAAACCATCAAAACCCACACCAAATGGCAACATTTCACTCTCTGCACTTGATAATAGAGCTGATAACAATGGCCTATGCCATATTGTTCAAATATATCAATCACCGAAAAATGACCAAAATGACCCTGCCCTTATGATCAAAGAAGCACTCTCAAAGGCTTTGTTTTATTACTACCCTTTGGCGGGTAGAATAGTAAAACATGCTGATGGGAAACTTAGAGTTAATTGCAATGCAAATGGAGTTCCCTTTGTAGAAGCCATTGCTAATTGCAACCTTTCTTCTCTTCACTACCTTGATGGTAGTAACACAGAGATTGCAAAACACTTGGTACTTGATCTTCCTTCTGAAGATGAACATGGTTTCCAATTATACCCTTTGTTGATCAAGGTAACCAAGTTTCTATGTGGGGGTTTCACAATTGGCTTAGGAACCTCACATGCTATAATTGATGGGAGTGGAAAATCTCAATTCTTGCAAGCCATAGCCGAATTTGCAAGTGGAAAAACCGAGCCATCGGTGAAGCCTGCATGGGAGAGAGAAAAGCTTGTTGGGTCAATTACCAAAATGCCCTTGGAGATTCCTATGGATGAGTCTTCTGCCGCAGTCTCACCTTATTTGCCCACCAAAAAACTTGTTCACGCATGCTTTAAAGTTGACAATGAGAGCATAAAAAGGCTCAAGATGAGTTTGATGAAGGAAACTATTAGTGACCAAAACAATAACATGGAAGAAAGCTTCACAAGTTTTGAGTCTCTTGCTTCCTATGTTTGGAGGGCAAGAACAAGAACTTTGAAATTGAACAGTGATGGTAAAGTTATGTTGACTATCATAGTAGGGATAAGAAAGGACCTTCTTGATCCTCCTTTGGCTAAAGGGTATTATGGGAATATTGCTGTGGATGCAAATATTGTGTTGACTGCTAGAGAAGTCAACGAAAGACCACTCTCCCATGTAGCGAAGGTCATCAAAGAAACTAAGAAGGTTGCTCAGACAAAGGAGTACGTCAAGAGAATGATCGACACGTCGGCGACGGCGGCCGACGACGATTTCGATTACGATGGAAGGGGTGCGTGCATGGTTTTGACAGACTGGAAACATTTGGGTTTTTCAAAGAACATGGATTTAGGATGGACACAACCGGTGAATTTTGTTCCTGCCCCATGTGGTTTGTTTGATAAATTGCATTTGTGTATTTTCTCATCTCCGAGTAGCTTGGATCCTTCAATGGATGGAGGTGCTAGGATCTTTGTGTCACTCCCCAATGCTGCCATGCCCAAGTTTAGGAACGAGATTGAAGCTCTTATTACTAAACCATAG 1374 0.4098 MANHHKRTLKFDIKQIVYVKPSKPTPNGNISLSALDNRADNNGLCHIVQIYQSPKNDQNDPALMIKEALSKALFYYYPLAGRIVKHADGKLRVNCNANGVPFVEAIANCNLSSLHYLDGSNTEIAKHLVLDLPSEDEHGFQLYPLLIKVTKFLCGGFTIGLGTSHAIIDGSGKSQFLQAIAEFASGKTEPSVKPAWEREKLVGSITKMPLEIPMDESSAAVSPYLPTKKLVHACFKVDNESIKRLKMSLMKETISDQNNNMEESFTSFESLASYVWRARTRTLKLNSDGKVMLTIIVGIRKDLLDPPLAKGYYGNIAVDANIVLTAREVNERPLSHVAKVIKETKKVAQTKEYVKRMIDTSATAADDDFDYDGRGACMVLTDWKHLGFSKNMDLGWTQPVNFVPAPCGLFDKLHLCIFSSPSSLDPSMDGGARIFVSLPNAAMPKFRNEIEALITKP* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0122 457 Gene3D - 6 209 IPR023213 -
Amo11g0122 457 Pfam Transferase family 13 452 - -
Amo11g0122 457 Gene3D - 225 450 IPR023213 -
Amo11g0122 457 PANTHER ACYL TRANSFERASE 4 6 454 - -
Amo11g0122 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0122 Amo-Chr11 1653172 1654800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0122 9 446 Monolignol Biosynthesis Gene Families AT5G48930 27.195 9.93e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0122 K20240 - gmx:100783730 489.189