Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0113 AGGCCTCACCTCGTCACTCTCTCCCCTCACCTCGTCTCCGGTCCGTCACTTTTCTCTCGGTCTCGGACTCATCTCAGACTGAAGCTCGTCGTCACGGTCTCGCACTCTGTCGCGCCTTCCCTGCGCTCGCTTCGTCAGCGGCAGAAGCAGACGGAACCAGCATCTGGTCCCTCTGGCGGTGGTGGTGGTCGTCTTGTTTCGGCCGTTAGTTCAGTTGGTCAACTTCCTCCACCGTCAGTCCCAGGTCATTTGTATTATATGGCATTGATATCCATTGGCAAAATCAAAGAAGAGATGGCTGGGCAATCAGATCCTGAGCTTTCACTGTTTTCAGCAGAGGAGCTTGAGTTCATTGCTGAGGATGAGATTGTGGACATTGTGCCCAATCTCAAGATGGGTCCTCTTAATTTCATCTCTGGAGATTTTGGCCCGTTCATCCCACAGATTGTTGCCCAAGTACCGCTTTGGCTGGCTGTTGCATTAAAAAAGAGGGGCAAGTGCTCCATTTGCCCTCCTCAATGGATGTCTGTTGAGAAGTTGACTCAAGTTTTGGAAGCTGAGCGAAACTCGCAAGAGATGTCAGAGCAACTGCCATTTCACTATGTAGAAATTTCTAGACTTCTGTTTGACCATGCAAATGATGACATTTCGGATGCATATATGGTGAGATCTCTAATTGAGGACATCAGAGATGTACGATTTCATAAGGTTGAAACTGACCTGGAGGCATTCAATGGTCGCACAATTGCTGTTAAGAGGCAACTGCGAAGATAA 774 0.4871 RPHLVTLSPHLVSGPSLFSRSRTHLRLKLVVTVSHSVAPSLRSLRQRQKQTEPASGPSGGGGGRLVSAVSSVGQLPPPSVPGHLYYMALISIGKIKEEMAGQSDPELSLFSAEELEFIAEDEIVDIVPNLKMGPLNFISGDFGPFIPQIVAQVPLWLAVALKKRGKCSICPPQWMSVEKLTQVLEAERNSQEMSEQLPFHYVEISRLLFDHANDDISDAYMVRSLIEDIRDVRFHKVETDLEAFNGRTIAVKRQLRR* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0113 257 Gene3D - 176 256 - -
Amo11g0113 257 Gene3D - 110 175 - -
Amo11g0113 257 SUPERFAMILY GINS helical bundle-like 171 246 IPR036224 -
Amo11g0113 257 MobiDBLite consensus disorder prediction 41 55 - -
Amo11g0113 257 Pfam GINS complex protein 152 245 IPR021151 -
Amo11g0113 257 SUPERFAMILY PriA/YqbF domain 110 169 - -
Amo11g0113 257 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 99 252 IPR007257 GO:0005634|GO:0006260
Amo11g0113 257 MobiDBLite consensus disorder prediction 41 68 - -
Amo11g0113 257 CDD GINS_A_psf2 164 246 - -
Amo11g0113 257 Coils Coil 252 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0113 Amo-Chr11 1518268 1525770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0113 99 244 Core DNA Replication Machinery Family AT3G12530 71.233 9.84e-75 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0113 K10733 - gmx:100780528 275.404