Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0109 ATGGCAAATAACAATGCAACTACACTCTCACTTGAGATGAAGGATGTTGTGATCATTAAACCTTCCAAACCAACACCTTCTTGTGTTCTTRCTCTATCAAGCATTGACAACAATCCTGAGCTCAACGTTCTCTGTCACATCATTTATGCATACCAAGCAAATCTTYATGACCCAAAAGGCCAATTACTATTAGATCCTTGTCATGTGATAAAACAAGGCATTTCAAAGGCTTTGGTTTACTATTACCCTCTTGCAGGTAAGATAATAACAAATAATGGTGGTGATGGAAGACTTGGAATCAAGTGCAATAATGTTGATGATGGAGTTCCATTCTTGGAGGCAGATGCTAATTGTGAACTCTCTTCTCTTCACTATCTTGAAGGGATTGATGTTCCAACAGCACAGAAATTGGTGTTTGATTATGACAACCCTTCTCTTCATCATGATCAAACTAGTCAACATCCCTTGGTTTTCAAGGTAACAAAGTTTCTTTGTGGCGGTTTCACAATTGGAATGGGATTGTCACATGCTGTTTGTGACGGTTTTGGTGCGTCGCAATTCTTTAGAGCTGTTGCTGAACTTGCAAGTGGGAAAAGTGAGCCTTCTGTGAAACCTGTGTGGGAGAGGGAGAGACTAATCGGAACAGTTCTCAAGCAACCACTGAAATTTCCGTTAGATAAAACTTCAATGGCAGTTTCACCATTTTGGCCATCTAATGAGCTTTCACATGAATGCTTTCACTTCAAGGGTGAGAGCATAAAGAGACTCAAAATGGAGTTGATGAAGGAAAATGGTGATGATAATAATGGTAAGGAAAGCTTCACAACACTTGAAGCACTTGGTGCCTATGTTTGGAGATCAAAGGCSAGAGCTATGGAATTGAGTAGTGATGGGAAGACTTTYTTGTGTTTAGCAGTTGGTGTGAGGCACCTATTGGATCCACCTTTGCCAGAAGGGTATTATGGGAATGCTTTTGTGAATTCAAATGTGGTCTTAACAGTGAAAGAACTTAATAAGAAACCACTCTCAGAGGTTWTGAAGCTCATTAAGGAAAGCAAAAAACAACCTTGTAATATGGAATACATAAGAAGCAACATCAACATGTTGGAGACAATGAGGAAATGTAACATTAAGATTGGAGGTTTAGGTGCATCAATGGTATTAACAGATTGGAGGCAATTGGAATTGTTGGATGAAGTGGATTTTGGATGGAAAGCTTCGGTTAATATGATACCTCTCCCTTGGAACATGTTTGGCTATGTGGATSTGACCCTTTTCTTGCCTCCTAGTAACTTTGATCCTTCAATGAAAGGAGGTGTTAGAGTTTATGTTTCCCTTCCCAAAGCTTCCATGCCCAAGTTCAAGGAGGAGATGGAGGCTCTCAAGATTATGAAAGATGAGGAAAGCAAGGTTGTCAAACTCCCGAATTTAGTGAATTTACAAGTTTAA 1449 0.3941 MANNNATTLSLEMKDVVIIKPSKPTPSCVLXLSSIDNNPELNVLCHIIYAYQANLXDPKGQLLLDPCHVIKQGISKALVYYYPLAGKIITNNGGDGRLGIKCNNVDDGVPFLEADANCELSSLHYLEGIDVPTAQKLVFDYDNPSLHHDQTSQHPLVFKVTKFLCGGFTIGMGLSHAVCDGFGASQFFRAVAELASGKSEPSVKPVWERERLIGTVLKQPLKFPLDKTSMAVSPFWPSNELSHECFHFKGESIKRLKMELMKENGDDNNGKESFTTLEALGAYVWRSKARAMELSSDGKTFLCLAVGVRHLLDPPLPEGYYGNAFVNSNVVLTVKELNKKPLSEVXKLIKESKKQPCNMEYIRSNINMLETMRKCNIKIGGLGASMVLTDWRQLELLDEVDFGWKASVNMIPLPWNMFGYVDXTLFLPPSNFDPSMKGGVRVYVSLPKASMPKFKEEMEALKIMKDEESKVVKLPNLVNLQV* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0109 482 Gene3D - 237 458 IPR023213 -
Amo11g0109 482 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 462 - -
Amo11g0109 482 PANTHER ACYL TRANSFERASE 4 5 462 - -
Amo11g0109 482 Gene3D - 6 220 IPR023213 -
Amo11g0109 482 Pfam Transferase family 10 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0109 Amo-Chr11 1476221 1478529 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0109 9 456 Monolignol Biosynthesis Gene Families AT5G48930 27.061 1.74e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0109 K20240 - gmx:100801843 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0109 11 1476221 1478529 Amo01g0559 01 8192908 8195107 hybridization