Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0106 ATGGGATATGAAAAACCATTCCTTGACCTTAAGGTTAGCATGGAAGATGTTATCTTTGTAAAGCCATCAAAACCAACTCCTTCATCTGTAATCTCTCTATCCACAATTGATAATAGACCAGAACTTAATAGTCTATGTCAAACCATTCACATATTTAAACCACCAAATAACACTATTCTTATTGATGATCCTCAAAATGCCCAAAATGACCCTGCACTTGTGATCAAAGAAGCACTCTCCAAGGCTTTGTTCTATTACTACCCTCTTGCTGGAAGGCTTGTAAAACATGCTGATGGGAAACTTAGAATCCATTGCAATGCATATGGAGTTCCATTTGTGGAATCCATTGCAAATTGCAAGCTTTCTTGCCTTCACTACCTTGATGGTAGTGACACTGAAAATGCAAAACACTTGGCTTTTGATAATCCTTTTCATGAAGATGATGATGAAAATGGTTACCAATATCCCTTGGGAATAAAGGTGACCAAGTTTCTCTGTGGCGGGTTCACAGTTGGAATAGGCGCATCACATGCTGTTTTTGATGGAATTGGAGGATCTCAATTCTTTCAAGCCATGGCTGAACTCGCGAGCGGAAAAAGCGAGCCATCTGTGAAACCTGTGTGGGAGAGGGAAAGGCTAAATGGGTCAATTACTGAACATCCATTGCTAAGTCCCATGGATGAGGCGTCGGCCGCGGTTTCACCTTACTTGCCCACCAAAACTCTCGTGCATGAATGTTTTAAGGTGGATAGTGAGAGCATAAAAAGACTCAAAAAGAGTTTATTGAAGGAAATAAGTTATAGCAATAATATTGATTACTCTTTGGAGGGTGAAAGCTTTACAAGTTTTGAAGCCCTTGGTGCTTATGTTTGGAGGTCAAGAACTAGAGCTTTGAAACTCAACTATGATGGAAAAACTTCATTGGCTATTGTTGTAGGGTTAAGAAGGAATCACTCCTTGATTCCTCCTTTGCCTGAAGGGTATTATGGGAATGCTTTTGTGGACCCAAAAGTTGTGCTAACAGTAAAGGAACTCAATGAAAAGCCACTCTCACATGTGGTGAAGATGATCAAAGAGACTAAGAAGCTTGGTTTCTCAAAGGAGTATATTAGGAATGCTATTGACACAAAAGAGACAAAAATAGAGCACTTTGATTATCAAGGTATCGGTGCATCTATGGTTTTGTCTAGTTGGATGCACTTGGGTATGTTGGAAAACATGAACAAAGGGTGGGCTAAGCCAGTGAACATGGTACCGGCACCATGCAACATGTTTGGGACAGTTGGAGTGTGCATTTTTTCACCTCCTAGTGACTTGGATCCTTCAATGAATGGAGGTGTTAGAATCTTTGTTTCTCTACCTAATGATGCTATGCCCATGTTCAAGGAGGAGATGGAAGCTCTCATGCTTGTTAAACCATAG 1422 0.4051 MGYEKPFLDLKVSMEDVIFVKPSKPTPSSVISLSTIDNRPELNSLCQTIHIFKPPNNTILIDDPQNAQNDPALVIKEALSKALFYYYPLAGRLVKHADGKLRIHCNAYGVPFVESIANCKLSCLHYLDGSDTENAKHLAFDNPFHEDDDENGYQYPLGIKVTKFLCGGFTVGIGASHAVFDGIGGSQFFQAMAELASGKSEPSVKPVWERERLNGSITEHPLLSPMDEASAAVSPYLPTKTLVHECFKVDSESIKRLKKSLLKEISYSNNIDYSLEGESFTSFEALGAYVWRSRTRALKLNYDGKTSLAIVVGLRRNHSLIPPLPEGYYGNAFVDPKVVLTVKELNEKPLSHVVKMIKETKKLGFSKEYIRNAIDTKETKIEHFDYQGIGASMVLSSWMHLGMLENMNKGWAKPVNMVPAPCNMFGTVGVCIFSPPSDLDPSMNGGVRIFVSLPNDAMPMFKEEMEALMLVKP* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0106 473 Gene3D - 7 226 IPR023213 -
Amo11g0106 473 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 469 - -
Amo11g0106 473 PANTHER ACYL TRANSFERASE 4 7 469 - -
Amo11g0106 473 Gene3D - 228 465 IPR023213 -
Amo11g0106 473 Pfam Transferase family 11 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0106 Amo-Chr11 1443770 1445191 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0106 10 463 Monolignol Biosynthesis Gene Families AT5G48930 26.923 1.00e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0106 K20240 - gmx:100801843 522.316