Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0099 ATGGCTATCCACTCATCAAATAATAATTACTTCTACATTATGTTTACTTCTTCCCTATTATTTGGCATATGTTCATCTCAGCTAACATCAAATTTCTATGATTCAACATGTCCCAAGGCACTCTCTATAATCAAATCTGCAGTGGCCAGTGCAGTGGCGAAAGAGCATCGAATGGGTGCATCGTTGCTTCGTCTTCATTTCCATGATTGCTTTGTTAATGGATGTGATGCATCAATTTTATTGGATGACACTTCAACATTTACCGGAGAGAAGACAGCTGCTCCAAATTTGAATTCTGTTAGAGGTTTTGATGTAATTGATAACATCAAATCTCAATTGGAGAGTGCTTGTCCTGGAATTGTTTCTTGTGCTGATATTCTCGCTATTGCTGCTCGTGATTCTGTTGTTTCATTGGGTGGTCCATCATGGAATGTTGGATTGGGCAGAAGAGATTCAACAAGTGCAAGCAAAGATGCAGCAACTAAGGATATTCCATCCCCTCTTTTGGATCTTAGTGGCCTCATAACTGCTTTCTCCAATAAGGGTTTCACCACTCAAGAGATGGTAGTCCTCTCAGGAGCTCATACAACAGGACAAGCAAGATGCCAAATATTCAGAGGAAGAATCTACAATGAAACAAACATTGACACAAACTTTGCAACATCAATGAAATCAAATTGTCCAAGCAGTGATGGAGACAGCAACCTCACAGCACTTGATGTCACAACAAATGTGCTTTTTGACAATGCTTACTTCAAGAACCTTGTCAACAACAAAGGCCTTCTTCATTCTGATCAGCAGCTCTTTATTAGTGGCGGTTCCACTAACTCTCTTGTCACTAACTATAGCAACAGTTATTCAGCTTTCTTTGCTGACTTCGCTAGTGCTATGGTCAAAATGGGAAATTTAAGCCCTTTAACTGGTACAACTGGCCAGATTCGTGCCAATTGCACCAAAGTTAATTAA 966 0.3986 MAIHSSNNNYFYIMFTSSLLFGICSSQLTSNFYDSTCPKALSIIKSAVASAVAKEHRMGASLLRLHFHDCFVNGCDASILLDDTSTFTGEKTAAPNLNSVRGFDVIDNIKSQLESACPGIVSCADILAIAARDSVVSLGGPSWNVGLGRRDSTSASKDAATKDIPSPLLDLSGLITAFSNKGFTTQEMVVLSGAHTTGQARCQIFRGRIYNETNIDTNFATSMKSNCPSSDGDSNLTALDVTTNVLFDNAYFKNLVNNKGLLHSDQQLFISGGSTNSLVTNYSNSYSAFFADFASAMVKMGNLSPLTGTTGQIRANCTKVN* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0099 321 ProSiteProfiles Plant heme peroxidase family profile. 27 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 SUPERFAMILY Heme-dependent peroxidases 27 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 Gene3D Peroxidase, domain 2 165 300 - -
Amo11g0099 321 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Amo11g0099 321 PANTHER PEROXIDASE 20 321 - -
Amo11g0099 321 Gene3D - 31 317 - -
Amo11g0099 321 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 Pfam Peroxidase 45 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0099 321 CDD secretory_peroxidase 27 320 IPR033905 GO:0004601|GO:0042744
Amo11g0099 321 PANTHER PEROXIDASE 72-RELATED 20 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0099 Amo-Chr11 1319234 1322848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0099 23 321 Peroxidase AT5G05340 63.455 7.99e-140 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0099 K00430 - gmx:100818176 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0099 11 1319234 1322848 Amo11g0099 11 1319234 1322848 ECH
Amo11g0099 11 1319234 1322848 Amo17g0719 17 16532025 16537117 ECH
Amo11g0099 11 1319234 1322848 Amo17g0732 17 17011560 17015655 PCT
Amo17g0732 17 17011560 17015655 Amo11g0099 11 1319234 1322848 PCT