Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0098 ATGAGTAATTCTCAAATAATCCAGTATTATTTTTTGGTTATTGTTGTTATGGTCACTACTAATTTGGGCACATGGGTAATCCCTACCAATGGCATGAACAATGATGATAATGGAAGGCTCACTCACCATTTCTATAAGAAAACATGCCCTAAGGTGTTGCCAGTGATAAGGTCTGTGGTTGAAAAGGCAATAAAGAAAGAACCGCGCATTGGAGCTTCATTGCTACGTTTGCATTTTCATGACTGCTTTGTTAATGGTTGCGATGCATCAGTTCTGCTAGATGATTCTTATAACATAAATGGTGAGAAGAATTCGCCACCAAATAAGAACTCGCTAAGAGGATTTGAAGTGGTTGATGAGATTAAATCAGAATTAGACAAAGCTTGCAAGGGTCCTATTGTATCATGTTCTGATATCTTAGCTGTGGCGGCTCGTGATTCTGTTGCTATTCTAGGGGGTCCACACTTTGGTTACCATGTGCTCTTAGGAAGAAGAGACGCTAGAAGTGCAAGCAATGAAGCTGCAAATACAAGCCTTCCTTCCCCATCTTCAAGCTTCTCAGAGCTTCTCTCTAACTTCAAGTCTCATGGGCTGGGCCTTAAAGACCTTGTGGCCCTTTCTGGGGCCCACACTATTGGATTTGCTCAATGTTCCTCTTTTAGGGATAGGATCTACAATGACACCAACATTGACCCAAAACTTGCATCCTATTTGAAATTACAAAAGTGCCCTCAAAGTGGTGGAGATAGTAATTTGGCACCATTTGATTCCACTAATAAAATATTTGACAATGTCTACTACAAGCAATTGTTGGATAACAAGGGGCTTCTTCATTCTGATCAAGAACTCTTCAAGGGGAATAATAGTGAGAGTGATAGGTTGGTGAAGCTATTTACTAGGAATCCAGTTGCTTTTGCTAAAAGATTCGGACATTCTATGATCAAGATGGGTAACATGAAGCCTCTTACCGGAAATGAGGCAGCACTCACTCCTAATTTCTATAAGAAAGTTTGTCCAAAAGCATTGCCAGTGATAAGGAGAGTGGTTCAAAAGGCAATAAATCGTGAAAGGCGCATGGGAGCTTCTTTGCTGCGTTTGCATTTCCATGATTGCTTTGTTAATGGATGTGATGGATCGATTCTGCTAGATGACACGAAGAACTTCACCGGAGAGAAGACAGCAAAACCAAACCTTAACTCAATCAGAGGTTTGGAAGTGGTTGATGAGATTAAGGCTGCTGTTGATAAAGCTTGCAAACGACCTGTCGTTTCATGTGCCGATATCTTAGCTGTTGCTGCTCGTGACTCTGTTGCCATTTTGGGTGGTCCACAATTTTGGTACAAAGTACTATTAGGAAGAAGAGACGCAAGAACCGCAAGCATAACCGCCGCAAATAACAACCTACCAGCACCATTCTTAAACTTCACACAATTGGTTACAAGCTTCAACAACGTTGGACTAAACACCAAGGACCTAGTTGTACTTTCAGGTGGCCACACAATTGGGTTTGTAAGGTGCACAACGTACAGGAATAGAATCTACAACGACACAAACATTGAAACTAATTTTGCAACATCTCTAAGGAGGAATTGTCCTAGGACTAGTGGTGTTGGGGACAACAATTTGACACCGTTGGATCCAACTCCATCAAGTGTTGATAATTTGTACTACAAAGCGTTGTTGGGCAAAAAGGGAATTTTACATTCGGATCAGGAGTTATATAAGGGGAATGGTAGTGAGAGTGATAAGTTGGTGGAGCTTTATAGCAAGAACCCTTTTGCGTTTGCTAGAGACTTCAAAAATTCAATGATCAAAATGGGTAATATGAAGTCTCTTACTGGAAACAAT 1848 0.4091 MSNSQIIQYYFLVIVVMVTTNLGTWVIPTNGMNNDDNGRLTHHFYKKTCPKVLPVIRSVVEKAIKKEPRIGASLLRLHFHDCFVNGCDASVLLDDSYNINGEKNSPPNKNSLRGFEVVDEIKSELDKACKGPIVSCSDILAVAARDSVAILGGPHFGYHVLLGRRDARSASNEAANTSLPSPSSSFSELLSNFKSHGLGLKDLVALSGAHTIGFAQCSSFRDRIYNDTNIDPKLASYLKLQKCPQSGGDSNLAPFDSTNKIFDNVYYKQLLDNKGLLHSDQELFKGNNSESDRLVKLFTRNPVAFAKRFGHSMIKMGNMKPLTGNEAALTPNFYKKVCPKALPVIRRVVQKAINRERRMGASLLRLHFHDCFVNGCDGSILLDDTKNFTGEKTAKPNLNSIRGLEVVDEIKAAVDKACKRPVVSCADILAVAARDSVAILGGPQFWYKVLLGRRDARTASITAANNNLPAPFLNFTQLVTSFNNVGLNTKDLVVLSGGHTIGFVRCTTYRNRIYNDTNIETNFATSLRRNCPRTSGVGDNNLTPLDPTPSSVDNLYYKALLGKKGILHSDQELYKGNGSESDKLVELYSKNPFAFARDFKNSMIKMGNMKSLTGNN 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0098 616 SUPERFAMILY Heme-dependent peroxidases 40 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 Gene3D Peroxidase, domain 2 469 606 - -
Amo11g0098 616 Gene3D Peroxidase, domain 2 180 316 - -
Amo11g0098 616 ProSiteProfiles Plant heme peroxidase family profile. 39 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Amo11g0098 616 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Amo11g0098 616 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 CDD secretory_peroxidase 329 616 IPR033905 GO:0004601|GO:0042744
Amo11g0098 616 ProSitePatterns Peroxidases proximal heme-ligand signature. 491 501 IPR019793 -
Amo11g0098 616 ProSitePatterns Peroxidases active site signature. 360 371 IPR019794 GO:0004601
Amo11g0098 616 Gene3D - 332 615 - -
Amo11g0098 616 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PANTHER PEROXIDASE 72-RELATED 327 615 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PANTHER PEROXIDASE 72-RELATED 26 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 PANTHER CATIONIC PEROXIDASE 26 327 - -
Amo11g0098 616 PANTHER CATIONIC PEROXIDASE 327 615 - -
Amo11g0098 616 CDD secretory_peroxidase 40 326 IPR033905 GO:0004601|GO:0042744
Amo11g0098 616 Pfam Peroxidase 346 590 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 Pfam Peroxidase 57 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 Gene3D - 44 327 - -
Amo11g0098 616 ProSiteProfiles Plant heme peroxidase family profile. 338 616 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0098 616 SUPERFAMILY Heme-dependent peroxidases 329 615 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0098 Amo-Chr11 1283273 1310647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0098 326 614 Peroxidase AT5G05340 60.000 2.15e-117 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0098 K00430 - gmx:100816056 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0098 11 1283273 1310647 Amo11g0098 11 1283273 1310647 ECH