Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0097 ATGAAAAGAAAATGTCCACAAGTTTTCAATGCTGTGAAATCTGTTGTTGAAGATGCTGTGGCCAAAGAACAACGCCTTGGTGCTTCTATTCTTCGCCTCTTCTTCCATGATTGCTTTATTGATGGTTGTGATGGATCATTGTTATTGGATGATACATCAACATTCAAAGGAGAGAAGACAGCAGCAGCAAATAACAACTCAGTGAGAGGGTTTGAAGTAATTGATGCAATCAAGTCAAAGGTTGAAGCTTTGTGCCCCGGTGTTGTTTCATGTGCTGATATCTTGGCCATTGCTTCTCGTGATGCTGTTGTTATTCTTGGAGGGCCTTTTTGGGATGTGAAACTTGGAAGAAGGGATTCAAGAACAGCAAATTTCACAGCTGCCAACACTGGTGTAATTCCAGCTCCCACTTCTAACCTTAGTACCCTAATTTCCAATTTTAAGTCACATGGCCTTGATGTCAAGGACTTGGTTGCCTTATCTGGATCTCACACAATTGGCAAAGCAAGGTGTACAAGTTTCAGAGGTCACATATACAATGACACCGACATTGACCCTTCATTTGCCAAGTTAAGGCAGAAAAATTGTCCAAGGCAAAATGGCACAGGAGACAACAATTTAGCACCCTTGGACCTACAAACACCCACACATTTTGAGAACAACTACTACAAGAACCTCATCAACAAAAAGGGTCTCCTTCATTCTGATCAAGAACTCTTCAATGGTGGATCCACTGATTCACTTGTTAAGGCCTATAGTCAGAATAATAAGGCCTTTGCTTCTGACTTTGTTACTGGAATGATTAAGATGGGGAACATCCTGCCCTTAACTGGGTCAAAAGGGGAGATAAGGAAGAATTGCAGAAGAGTGAATTAG 876 0.4144 MKRKCPQVFNAVKSVVEDAVAKEQRLGASILRLFFHDCFIDGCDGSLLLDDTSTFKGEKTAAANNNSVRGFEVIDAIKSKVEALCPGVVSCADILAIASRDAVVILGGPFWDVKLGRRDSRTANFTAANTGVIPAPTSNLSTLISNFKSHGLDVKDLVALSGSHTIGKARCTSFRGHIYNDTDIDPSFAKLRQKNCPRQNGTGDNNLAPLDLQTPTHFENNYYKNLINKKGLLHSDQELFNGGSTDSLVKAYSQNNKAFASDFVTGMIKMGNILPLTGSKGEIRKNCRRVN* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0097 291 ProSitePatterns Peroxidases proximal heme-ligand signature. 156 166 IPR019793 -
Amo11g0097 291 CDD secretory_peroxidase 2 290 IPR033905 GO:0004601|GO:0042744
Amo11g0097 291 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PRINTS Haem peroxidase superfamily signature 211 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PRINTS Haem peroxidase superfamily signature 27 41 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PRINTS Haem peroxidase superfamily signature 156 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PANTHER PEROXIDASE 72-RELATED 4 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 SUPERFAMILY Heme-dependent peroxidases 3 291 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 ProSitePatterns Peroxidases active site signature. 27 38 IPR019794 GO:0004601
Amo11g0097 291 Pfam Peroxidase 12 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 Gene3D Peroxidase, domain 2 134 270 - -
Amo11g0097 291 Gene3D - 2 291 - -
Amo11g0097 291 PANTHER PEROXIDASE 4 290 - -
Amo11g0097 291 PRINTS Plant peroxidase signature 5 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PRINTS Plant peroxidase signature 107 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PRINTS Plant peroxidase signature 209 224 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PRINTS Plant peroxidase signature 88 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PRINTS Plant peroxidase signature 265 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PRINTS Plant peroxidase signature 155 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PRINTS Plant peroxidase signature 69 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PRINTS Plant peroxidase signature 225 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 PRINTS Plant peroxidase signature 29 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0097 291 ProSiteProfiles Plant heme peroxidase family profile. 1 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0097 Amo-Chr11 1238410 1243072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0097 4 291 Peroxidase AT5G05340 64.931 3.83e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0097 K00430 - gmx:100813384 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0097 11 1238410 1243072 Amo17g0719 17 16532025 16537117 PCT
Amo17g0719 17 16532025 16537117 Amo11g0097 11 1238410 1243072 PCT