Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0094 ATGGAGAGTAAATCAATTGTTCTGTTGGAAAGATATGAGTTAGGAAGATTACTAGGGCAGGGTACCTTTGGGAAGGTTTACTATGCACGGAGTGCGATAACTAACCAGAGTGTGGCTATTAAGATGATTGACAAAGATAAGGTTATGAAAACTGGGCGTGCCGAACAAATCACGCGCGAGATATCTGTTATGAGAAGGGCTAGGCATCCCAATATTATACAGCTTTTCGAGGTTATGGCCACCAAGACTAAGATTTACTTTGTTATTGAAATTGCTAAAGGTGGTGAACTCTTCGACAAGGTGTCCAAGGGAAAACTCAAGGAAGATGTTGCTCACAAGTATTTTAGGCAGCTAATCAATGCAGTAGATTATTGTCACAGTAGAGGCGTATACCACAGAGATATAAAGCCGGAGAACATTCTGTTGGATGAAAATGGGGACCTAAAGATATCTGATTTTGGGTTAAGTGCGCTCGCGGAGTCCAAGCGGCAGGATGGCCTACTCCATACACCTTGTGGCACCCCTGCCTATGTTGCTCCTGAAGTCATCAAAAGGAAGGGATATGATGGTGCAAAAGCTGATATTTGGTCTTGTGGAATTGTTCTATTTGTCTTATTGGCAGGTTTTCTCCCTTTTCATGATGCAAATTTGATAGAGATGTATAGGAAGATAAGCAAGGCTGAATTAAAATTCCCGAGTTGGTTCCCGCCAGAAGTATGCAGGTTGTTGAGAAAGATGCTGGATCCAAATCCTGAAACCAGGATTACTATTGCCAAGATTACAGAAAATTCTTGGTTTAAGAGAGGACCTAAAGCTAAGCACAAAAAACTTGACGCAGAAACCACTAGCGTCTCTTCAGGTACAGTTTCTGATCTAAGTGATGAAGGTGAAGGTCTAGCAGCAGAAGCAAAGGAAGAACCAGTTGTGGCAACAAGTATAAATGCATTTGATATCATCTCCCTTTCTGCTGGTTTCGATCTTTCTTCATTTTTCGAAGACAGTTTTCAGAAAAGAGAAGCAAGGTTTAGTTCAAGACAACCTGCATCGGTCATCTTTTCCAAGCTGGAAGATGCTGCCAAGCGACTAAAGCTGAAGATAAAGAAAACAGCAGCTGGCTTGGTGAAATTGGATGGTTTAACCGAAGGTAGGAAGGGGGTTTTATCAATTGATGCCGAGATTTTCGAGGTTACTCCTATGTTCCATCTGGTGGAGGTGAAGAAATCCAATGGAGATACATTGGAATACCAGAAAATACTGCAAGAGGGTATAAGACCTGCACTTAAGGATATTATTTGGGTCTGGCAAAATGACCAACAGCAGCAACCACAAGAGCCAGAAGAACAGCCGCAGATAGATGACCAGCCGCCACAACCACCCGAGTCATAA 1386 0.425 MESKSIVLLERYELGRLLGQGTFGKVYYARSAITNQSVAIKMIDKDKVMKTGRAEQITREISVMRRARHPNIIQLFEVMATKTKIYFVIEIAKGGELFDKVSKGKLKEDVAHKYFRQLINAVDYCHSRGVYHRDIKPENILLDENGDLKISDFGLSALAESKRQDGLLHTPCGTPAYVAPEVIKRKGYDGAKADIWSCGIVLFVLLAGFLPFHDANLIEMYRKISKAELKFPSWFPPEVCRLLRKMLDPNPETRITIAKITENSWFKRGPKAKHKKLDAETTSVSSGTVSDLSDEGEGLAAEAKEEPVVATSINAFDIISLSAGFDLSSFFEDSFQKREARFSSRQPASVIFSKLEDAAKRLKLKIKKTAAGLVKLDGLTEGRKGVLSIDAEIFEVTPMFHLVEVKKSNGDTLEYQKILQEGIRPALKDIIWVWQNDQQQQPQEPEEQPQIDDQPPQPPES* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0094 461 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Amo11g0094 461 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Amo11g0094 461 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0094 461 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 447 - -
Amo11g0094 461 Gene3D Transferase(Phosphotransferase) domain 1 99 309 - -
Amo11g0094 461 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0094 461 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0094 461 CDD CIPK_C 314 428 - -
Amo11g0094 461 PANTHER - 2 447 - -
Amo11g0094 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Amo11g0094 461 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Amo11g0094 461 Gene3D Kinase associated domain 1, KA1 310 433 - -
Amo11g0094 461 MobiDBLite consensus disorder prediction 435 461 - -
Amo11g0094 461 Pfam NAF domain 311 368 IPR004041 GO:0007165
Amo11g0094 461 Gene3D Phosphorylase Kinase; domain 1 5 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0094 Amo-Chr11 1205946 1208371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0094 1 440 CBL-interacting serine-threonine protein kinases AT5G58380 67.615 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo11g0094 Pkinase 4.6e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0094 - - gmx:100790905 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0094 11 1205946 1208371 Amo11g0094 11 1205946 1208371 ECH
Amo11g0094 11 1205946 1208371 Amo17g0705 17 16273274 16275935 ECH
Amo17g0705 17 16273274 16275935 Amo11g0094 11 1205946 1208371 ECH
Amo11g0094 11 1205946 1208371 Amo17g0705 17 16273274 16275935 PCT
Amo17g0705 17 16273274 16275935 Amo11g0094 11 1205946 1208371 PCT