Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0093 ATGGCACCTCTCATTGTGGATATGAAAGATGTTGTATTTATCAAACCATCTAAGTCTACACCTTCTTCTATTCTCTCTCTATCTACACTTGATCAGAGACCTGACCTTAATATGTTATGGCATATCATTCAAGTTTACAAATCACAAAAACATGATGGTTACCCAAATGACCAAATTGACCCTAACCCTATTAATGTGATAAAAAAATCACTCTCAATGGCCTTGTTCTATTACTACCCTCTTGCTGGGAAGATAGTCAAACATGATGATGGGAAGTTTAGAGTTCATTGCAATTCCAATGATAGAGTTCCATTTATAGAAGCAATTGCTAATTGCAATCTTTCATCTCTTCATTACCTTGATGGTATTGATGACATGGAAGTTGCAAAACAATTGGCCTTTGAGCTTCCTTCACAAGATGATGAAAGTGGACATCATTACCCTTTAGGGTTCAAGGTAACCAAATTTCTATGTGGAGGATTCACAATTGGAATTGGGGTCTCACATGTTGTATGTGACGGATTTGGAGTCTCTCAATTTCTTCATGCCATAATTGAGTTAGCAAGAGGAAGAAATGAGCCATCAATAAAGCCTGTTTGGGAAAGGGAGAGGCTGATGGGGTCAATTACCGAAATGCCCTTGCCGAGTCCTATCGATGATGCCTCGGCCGCCGTTTCACCATATCTTCCGACCACAACACTCGTACATGAATGCTTTAAGGTGGATGGAGAGAGTTTTAGAAGACTCAAAATGAGATTGATCAAAGAATTTACTAATCACAATAATATTAAGACTATGAAAGAAATTTTCACAAATTTTGAGTCACTCACTGCTTATATTTGGAGGTCAAGGGCTAGAGCCTTGAAACTAAACTATGATGGGAAAACTATGCTAGGCATATTAGTTGGGGCGAGAAGACATTTGGATCCACCTTTGCCTGAAGGGTATTATGGGAATGCAATTGTGGATGCAAATGTTGTCCTTTCAGTTAAAGAACTCATGGAGAAACCTCTCTCACAAGTTGTGAAGCACATCAAAGAGATCAAGAAAGTTGCTTTTACTAGAAACTATATCACGGATTCAATCAACACTTTGGTGACAAAAGAACAAGATTTTAATGTGGATGGTATTGGTGCATATTTTAATGCATCAAACTCGAATAATTTGGGAGCTGATCTCCCAGAACTGGCAATAACCTCCTCAAGTTTAGCATATAACTCATGGGTAGTTCTCATAACTGACAATAACCTCATCAAGTTTAGCATATAA 1269 0.3806 MAPLIVDMKDVVFIKPSKSTPSSILSLSTLDQRPDLNMLWHIIQVYKSQKHDGYPNDQIDPNPINVIKKSLSMALFYYYPLAGKIVKHDDGKFRVHCNSNDRVPFIEAIANCNLSSLHYLDGIDDMEVAKQLAFELPSQDDESGHHYPLGFKVTKFLCGGFTIGIGVSHVVCDGFGVSQFLHAIIELARGRNEPSIKPVWERERLMGSITEMPLPSPIDDASAAVSPYLPTTTLVHECFKVDGESFRRLKMRLIKEFTNHNNIKTMKEIFTNFESLTAYIWRSRARALKLNYDGKTMLGILVGARRHLDPPLPEGYYGNAIVDANVVLSVKELMEKPLSQVVKHIKEIKKVAFTRNYITDSINTLVTKEQDFNVDGIGAYFNASNSNNLGADLPELAITSSSLAYNSWVVLITDNNLIKFSI* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0093 422 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 390 - -
Amo11g0093 422 PANTHER ACYL TRANSFERASE 4 2 390 - -
Amo11g0093 422 Gene3D - 229 403 IPR023213 -
Amo11g0093 422 Pfam Transferase family 6 367 - -
Amo11g0093 422 Gene3D - 3 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0093 Amo-Chr11 1202040 1204896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0093 6 365 Monolignol Biosynthesis Gene Families AT5G48930 27.540 1.47e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0093 K20240 - gmx:100801843 412.149