Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0091 ATGCCGGAAATTGAAGACCACTCGCCACCGTCTCCGACGGAGCAAAGGGCTCTATTCGGGAAATACGACCTTGGAAGGCTCTTAGGATGCGGCGCGTTCGCGAAGGTTTACCACGCGCGGAACCTTGAGACTGGAGAAAGCGTGGCGGTGAAGATCATAAACAAGAAGAAGTTACAGGGAACCGGTTTAGCCGGTAACGTGAAGCGAGAGATAAACATAATGAGTAGGTTGCACCACCCTCACATCGTGAAGCTCCGCGAGGTTCTTGCGACGAAGACGAAGATCTTCTTCGTAATGGAGTTTATTAAAGGTGGTGAATTGTTTGCGAGGGTTTCTAAGGGGAGATTCTCGGAAGATCTGAGCCGTCAGTATTTTCATCAGCTGATCTCGGCCGTTGGATATTGCCACTCGCGTGGGGTGTTTCATAGGGATCTTAAACCGGAGAATCTCTTGCTTGATGAACATGGCAATTTGAAGGTTTCGGATTTTGGATTGAGTGCAGTTAGGGATCAGATACACCCTGATGGACTATTACACACGCTGTGTGGGACCCCTGCCTACGTGGCACCTGAGATTCTATCGAAACGCGGCTACGACGGTGCCAAAGTTGACGTATGGTCATGCGGCGTCGTTTTGTTCGTTCTAACGGCAGGGTACTTGCCGTTTAATGACCCGAACTTAATGGTTATGTATAGAAAGATCTACAAAGGAGAGTTTCGGTGTCCACGTTGGATGTCACCGGATCTCAAAAGATTCCTCCGGAAGCTTCTAGATGTTAACCCAGAGACAAGAATAACTGTCGAAGAAATGAAAAAGGATCCGTGGTTTAGAAAGGGCTACAAAGAGATTAAGCCTTATGAGGATGATTATGGGCTTGGGCTTGGGGTTGGGCCCAATAAGGTCTTGAATGCGTTTGATATAGTAACTTTTTCTTCCGGTTTGGATTTGTCAGGGCTGTTTGGTGATATTGGTAGTGGGAAGGGAGAGTGGTTGGTGGTTAGGGGGTTACCGGAGGAGGTGGTGGAGGTGGCGGAGGAGGTTGGGGTGGCGCAAGGGATGGCGGTGAGGTGGAAGAAGGAGGGTGGGGTTGACTTGGGAAGGATGAAAGGGGAATTGGAGATTGGGGTGGAAGCTTACCGGCTACCGGCCGAGATGGTTTTGGTTGAGGTTAGAAAGAAGTTTGGGGATGACGTGGCTTTTAGGGAACTTTGGGAGAATAAACTCAAGCCTAGGTTTCTCTTGTTAAAATGTGGTTCCGATGTTGCGACCACCTCGTCGCAACATAACGAGGAACCAGAGTCTCCGGTTCTAAACGAACAAAGCAGAAACAATAAACCAGAAGTGATTTATGATCAATGTTGA 1362 0.4868 MPEIEDHSPPSPTEQRALFGKYDLGRLLGCGAFAKVYHARNLETGESVAVKIINKKKLQGTGLAGNVKREINIMSRLHHPHIVKLREVLATKTKIFFVMEFIKGGELFARVSKGRFSEDLSRQYFHQLISAVGYCHSRGVFHRDLKPENLLLDEHGNLKVSDFGLSAVRDQIHPDGLLHTLCGTPAYVAPEILSKRGYDGAKVDVWSCGVVLFVLTAGYLPFNDPNLMVMYRKIYKGEFRCPRWMSPDLKRFLRKLLDVNPETRITVEEMKKDPWFRKGYKEIKPYEDDYGLGLGVGPNKVLNAFDIVTFSSGLDLSGLFGDIGSGKGEWLVVRGLPEEVVEVAEEVGVAQGMAVRWKKEGGVDLGRMKGELEIGVEAYRLPAEMVLVEVRKKFGDDVAFRELWENKLKPRFLLLKCGSDVATTSSQHNEEPESPVLNEQSRNNKPEVIYDQC* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0091 453 ProSiteProfiles NAF domain profile. 297 321 IPR018451 GO:0007165
Amo11g0091 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Amo11g0091 453 CDD CIPK_C 303 410 - -
Amo11g0091 453 Gene3D Kinase associated domain 1, KA1 298 415 - -
Amo11g0091 453 MobiDBLite consensus disorder prediction 423 445 - -
Amo11g0091 453 Pfam NAF domain 301 356 IPR004041 GO:0007165
Amo11g0091 453 SUPERFAMILY Protein kinase-like (PK-like) 19 284 IPR011009 -
Amo11g0091 453 Gene3D Transferase(Phosphotransferase) domain 1 12 291 - -
Amo11g0091 453 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0091 453 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0091 453 PANTHER - 1 436 - -
Amo11g0091 453 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 436 - -
Amo11g0091 453 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Amo11g0091 453 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0091 Amo-Chr11 1176178 1179657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0091 1 426 CBL-interacting serine-threonine protein kinases AT2G30360 60.780 0.0 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo11g0091 Pkinase 4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0091 - K12761 gsj:114377188 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0091 11 1176178 1179657 Amo11g0091 11 1176178 1179657 ECH
Amo11g0091 11 1176178 1179657 Amo17g0699 17 16130012 16133159 PCT
Amo11g0091 11 1176178 1179657 Amo07g0871 07 15897429 15900585 PCT
Amo17g0699 17 16130012 16133159 Amo11g0091 11 1176178 1179657 PCT
Amo07g0871 07 15897429 15900585 Amo11g0091 11 1176178 1179657 PCT