Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0055 ATGGCTGATGAACCACAAAATGATATGAAGGAGGAGGTTGCAGAGATTACCCCATTTGATCCTAATAAGAAGAAGAAGAAAAAGAAAACCACAATCATAGATCCTGCAGATGATCTGGACAAGTTGGCTGAGAAGACTGAAAATTTAACAGTGGCTGAAGGGGTTGAGAGTACATTTGCTGGTTTGAAAAAGAAGAAGAAGAAGCCTGTTGAAATCAGCAACTTAAATGAAGAGGTTGGAGATGCAGTTGAAGATTTGGATGATGTTGCTGAACAAGATGAAGGAGACCCAATTTCCTTGCAGCCTCGTTATCCTTGGGAAGGGAGTGACCGTGATTATCAATATGAGGAGCTTCTTGGCAGGGTGTTCAACATTCTACGCGAGAATAATCCGGAACTTGCTGGAGACAGGCGGAGAACTGTTATGAGACCTCCACAGGTTCTTCGTGAGGGGACAAAGAAAACTGTGTTCGTGAATTTTATGGACCTATGCAAAACGATGCATCGACAGCCAGACCATGTTATGGCTTTCTTGCTTGCTGAACTGGGTACAAGTGGCTCTTTGGATGGACAGCAAAGACTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATATCAATGAATATGTTATTTGCCTTGGGTGTAAAAGTCCTGACACAATACTTTCCAAGGAGAATCGTCTGTTCTTCCTTCGATGTGAGAAGTGTGGATCAGGAAGATCAGTTGCTCCGATCAAGGCTGGTTTTGTGGCTCGTGTTGGCCGTAGGAATGCGGGCACATGA 804 0.4391 MADEPQNDMKEEVAEITPFDPNKKKKKKKTTIIDPADDLDKLAEKTENLTVAEGVESTFAGLKKKKKKPVEISNLNEEVGDAVEDLDDVAEQDEGDPISLQPRYPWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0055 267 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 267 - -
Amo11g0055 267 MobiDBLite consensus disorder prediction 1 30 - -
Amo11g0055 267 Gene3D - 110 252 - -
Amo11g0055 267 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 267 IPR045196 GO:0003743|GO:0006413
Amo11g0055 267 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 216 251 IPR016190 GO:0003743|GO:0006413
Amo11g0055 267 Coils Coil 72 92 - -
Amo11g0055 267 MobiDBLite consensus disorder prediction 1 22 - -
Amo11g0055 267 SMART eIF2Bneu4 137 246 IPR002735 GO:0003743|GO:0006413
Amo11g0055 267 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 112 219 IPR016189 GO:0003743|GO:0006413
Amo11g0055 267 Pfam Domain found in IF2B/IF5 136 245 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0055 Amo-Chr11 765960 769882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0055 1 263 Eukaryotic Initiation Factors Gene Family AT5G20920 77.154 4.49e-138 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0055 K03238 - gmx:100783618 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0055 11 765960 769882 Amo11g0055 11 765960 769882 ECH