Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0046 ATGTATCTTTCAAAGGGTTGCAAGCATCAAGTTCTTTTCATCTTGTGGTTCTGCTGCTACTTGCTACATGTTTCGGCGGAGAATAATATCACTGACCCTGTTGAAGTTGAAGCATTGAATGCCATAAAGCAAAGATTGAATGACCCTAATGGAAATTTGAGCAACTGGGGAGATAATGATCCATGTACATCGAAGTGGACAGGAGTTTTGTGCTACAATGAAACATTGGATGATGGATATCTACATGTTCAAGAACTGCAATTACTGAGTTTGAACCTGACAGGAAATTTGGCACCCGAGCTCGGCAACTTAACCCGTTTGTTAAGATTGAACTTTATGTGGAACAAGATAACTGGGAGTATTCCGAAGGAAATCGGTGAAATCAAAACTTTGCAACTCTTGCTTCTGAATGGAAACAACTTAACTGGTCCACTACCAGATGAGCTCGGCTATCTTCCGAATTTGGATAGGATACAAATTGATCAGAACAATATATCAGGGCCTGTACCTAAATCATTTGCAAACCTGAACAAGACAAAGCACTTCCACATGAACAATAATTCACTTAGCGGACAGATCCCACCGGAGCTTTTCCGGTTGCCGAGTCTTGTTCATCTTCTTCTTGATAACAACAAATTAACAGGATATCTTCCGAGTGACCTCTACAAGTTGCCAAACTTACTTATAATTCAACTTGATAACAATAACTTTGAGGGAAATACTATTCCAAGTTCTTATGGCAACATGTCAAAACTGCTGAAAATGAGTCTTAGGAATTGCAACTTGAGAGGACCAGTTCCTGATTTAAGCAGGATACCCCGCCTTCTTTATCTAGACCTCAGTTCCAATCAGTTGAATGGATCAATTCCTAGCAACAAGCTTTCCAACAACATCACAACCATTGATTTATCGAACAACAAGCTTACTGGAACTATTCCATCCTACTTTTCTAGTCTTCCTGTTCTTCAAAGATTGTCACTTGAAAACAATTTATTGAAAGGCAGTGTTTCTTCCACCATTTGGCAGAACAAGACTTTGAATGGCAAAAAATTTATCTTGGAGTTGCAAAACAATAGCCTTACAAGCATATCAGGCACTACTGATATTCCTCCAAATGTCACACTCTCGCTCAATGGGAATCCTCTATGCTCAAATAATAAGTCCTTGGTTCAATTCTGTGGATCTGAGACTGCTGACAATAACACAAATGGCATTGTTTCAACAAATTCCAGCTCATGCCCTGCTCAAGCGTGCCCTCCTCCTTTCGAATATTCCTTGGACTGTTTCTGTGCAGCACCATTGCTTGTCGGTTATCGGCTGAAAAGTCCTGGATTTTCGGATTTTCGACCATATGTGTTTTCCTTTCAGGAATACCTGAGTACAGGTCTTAGTATACAGATGGATCAGCTTCAATTTAGTTTTTATTGGCAAGCCGGACCTCGGTTGAGAATGGACTTGAAGCTTTTTCCAGTTTATGTTGATAACAGCAGCTCTCATATTTTCAATACAACCGAGCTCCTACGGCTCATGACCATGTTCACCGGATGGCACATTCAAGACAGTGATTTGTTTGGTCCTTATGAGTTACTTGGCTTCAATCTCCTTGATCCTTACAAGGGTGTGGTCATCCCCAAGTCTTCAAATTCAAAGATAAGTACAGGTGCTTTGGCTGGCATAATCTTAGGATCAATTGCCTGCGCCGTGACGTTATCTGCAATAGTTACACTCCTTATATTAAGAGTGAAGTTGAAAGATCGTCCTGTAGTTTCGAAGCGTCGTCATTCATCTAAGATCTCAATAAAAATTGATGGTGTAAGGGCCTTCACTTTTGGAGAATTATCTGCTGCTACCAACAATTTTAGCAACTCTTCTCAAGTAGGACAAGGAGGTTATGGCAAGGTTTACAAAGGTATTCTTTCTGATGGCACCGTTGTTGCCATTAAACGTGCGCAGGAGGGGTCACTGCAAGGTGAGAAAGAGTTCCTCACAGAAATATCATTACTTTCGAGGCTACATCATCGCAACCTTGTGTCTCTCCTTGGATACTGTGATGAAGAGGGTGAACAGATGCTGGTTTATGAATTCATGCCGAATGGTACACTAAGGGAACACATTTCAGTTACAGCAAAAGATCCTCTGAGTTTCGCCATGAGATTGAAGATTGCGCTAGGATCAGCAAAGGGTCTTATGTATTTACACACTGAAGCTGATCCTCCAATATTCCACAGAGATGTTAAAGCCAGCAACATATTATTGGACTCTAAGTTCACAGCAAAAGTGGCTGATTTCGGACTTTCGCGGCTCGCTCCAGTTCCTGATCTTGAAGGAGTTGTCCCTGGCCATGTATCCACAGTGGTAAAGGGAACCCCGGGTTATCTTGATCCAGAGTACTTCCTAACTCACAAGTTGACTGATAAAAGCGATGTTTATAGTCTTGGGGTTGTGTTTCTGGAACTTTTGACTGGGATGCAACCAATCTCACATGGCAAGAACATTGTTAGAGAGGTTAATGTTGCGTATCAATCTGGCGTAATATTTTCGATCATTGATGACCGCATGGGGTCCTATCCATCTGAGCATGTAGAGAAATTCTTGACCTTGGCCCTGAAGTGTTGCGAAGACGAGCCAGAAGCCCGGCCTAAAATGGCAGAGGTGGTTAGGGAGCTTGAGAACATATGGTCCATGATGCCAGAATCAGATACCCGGAAAGCCGAATCGATAACCAGTGATTCAGGAAAGTTAAGTACAAGTACACCATCTTCATCCTCTGCTATAAAGACTCCTTTTGTATCAGGAGATGTTTCAGGTAGTGACCTTGTTAGTGGAGTAATACCAAGCATCAAGCCAAGATAG 2853 0.4178 MYLSKGCKHQVLFILWFCCYLLHVSAENNITDPVEVEALNAIKQRLNDPNGNLSNWGDNDPCTSKWTGVLCYNETLDDGYLHVQELQLLSLNLTGNLAPELGNLTRLLRLNFMWNKITGSIPKEIGEIKTLQLLLLNGNNLTGPLPDELGYLPNLDRIQIDQNNISGPVPKSFANLNKTKHFHMNNNSLSGQIPPELFRLPSLVHLLLDNNKLTGYLPSDLYKLPNLLIIQLDNNNFEGNTIPSSYGNMSKLLKMSLRNCNLRGPVPDLSRIPRLLYLDLSSNQLNGSIPSNKLSNNITTIDLSNNKLTGTIPSYFSSLPVLQRLSLENNLLKGSVSSTIWQNKTLNGKKFILELQNNSLTSISGTTDIPPNVTLSLNGNPLCSNNKSLVQFCGSETADNNTNGIVSTNSSSCPAQACPPPFEYSLDCFCAAPLLVGYRLKSPGFSDFRPYVFSFQEYLSTGLSIQMDQLQFSFYWQAGPRLRMDLKLFPVYVDNSSSHIFNTTELLRLMTMFTGWHIQDSDLFGPYELLGFNLLDPYKGVVIPKSSNSKISTGALAGIILGSIACAVTLSAIVTLLILRVKLKDRPVVSKRRHSSKISIKIDGVRAFTFGELSAATNNFSNSSQVGQGGYGKVYKGILSDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLLGYCDEEGEQMLVYEFMPNGTLREHISVTAKDPLSFAMRLKIALGSAKGLMYLHTEADPPIFHRDVKASNILLDSKFTAKVADFGLSRLAPVPDLEGVVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNVAYQSGVIFSIIDDRMGSYPSEHVEKFLTLALKCCEDEPEARPKMAEVVRELENIWSMMPESDTRKAESITSDSGKLSTSTPSSSSAIKTPFVSGDVSGSDLVSGVIPSIKPR* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0046 950 Gene3D Ribonuclease Inhibitor 296 387 IPR032675 -
Amo11g0046 950 Gene3D Ribonuclease Inhibitor 187 295 IPR032675 -
Amo11g0046 950 SUPERFAMILY Protein kinase-like (PK-like) 605 912 IPR011009 -
Amo11g0046 950 Gene3D Ribonuclease Inhibitor 34 186 IPR032675 -
Amo11g0046 950 Pfam Protein kinase domain 621 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0046 950 Gene3D Transferase(Phosphotransferase) domain 1 696 913 - -
Amo11g0046 950 CDD STKc_IRAK 626 892 - -
Amo11g0046 950 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Amo11g0046 950 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 10 922 - -
Amo11g0046 950 MobiDBLite consensus disorder prediction 908 930 - -
Amo11g0046 950 SMART serkin_6 620 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0046 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 740 752 IPR008271 GO:0004672|GO:0006468
Amo11g0046 950 SUPERFAMILY L domain-like 41 393 - -
Amo11g0046 950 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 922 - -
Amo11g0046 950 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524
Amo11g0046 950 MobiDBLite consensus disorder prediction 899 950 - -
Amo11g0046 950 Gene3D Phosphorylase Kinase; domain 1 584 695 - -
Amo11g0046 950 ProSiteProfiles Protein kinase domain profile. 620 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0046 Amo-Chr11 615160 621953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0046 18 902 Receptor kinase-like Gene Family AT5G01950 58.686 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Amo11g0046 Pkinase 3.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0046 - - gmx:100799888 1476.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0046 11 615160 621953 Amo11g0046 11 615160 621953 ECH
Amo11g0046 11 615160 621953 Amo17g0674 17 14975772 14983133 PCT