Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo11g0042 | ATGAAGGCGGTGACCTACGGCCTCTCACCTTTCCACCAGAAGATCATGCCTGGTCTATGGAAGGACCTGCCTACCAAGATCCACCATAAGGTCTCCGAGAACTGGATCAGCGCCACCCTCCTCCTCGATTGGTATATCATTGAAATGAATAGTGAAAATGAAGGAAATGAGCTCCCGAAGAAGGGTGGTAAGAAACTAGTAATGGAGTCTATTTTCCATTTTAACTTTGTGAATGGTGCAGTTGGCCCCTCATTGAGCTAA | 261 | 0.4674 | MKAVTYGLSPFHQKIMPGLWKDLPTKIHHKVSENWISATLLLDWYIIEMNSENEGNELPKKGGKKLVMESIFHFNFVNGAVGPSLS* | 87 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo11g0042 | 86 | Pfam | Cytochrome b-c1 complex subunit 8 | 1 | 42 | IPR020101 | GO:0005750|GO:0070469 | |
| Amo11g0042 | 86 | SUPERFAMILY | Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 3 | 64 | IPR036642 | GO:0005750|GO:0006122 | |
| Amo11g0042 | 86 | PANTHER | CYTOCHROME B-C1 COMPLEX SUBUNIT 8 | 1 | 42 | IPR020101 | GO:0005750|GO:0070469 | |
| Amo11g0042 | 86 | Gene3D | - | 1 | 65 | IPR036642 | GO:0005750|GO:0006122 | |
| Amo11g0042 | 86 | PANTHER | CYTOCHROME B-C1 COMPLEX, SUBUNIT 8 | 1 | 42 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo11g0042 | Amo-Chr11 | 581104 | 584594 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo11g0042 | 1 | 42 | Chloroplast and Mitochondria Gene Families | AT3G10860 | 83.333 | 9.83e-21 | 76.3 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo11g0042 | - | - | csin:114286134 | 83.1889 |