Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0024 ATGCTTTTGCAGATGGGAGACGTGGCGAAGGACCTCACGGCGGGGACGGTGGGAGGGGCGGCGCAGCTAATATGCGGCCACCCCTTCGACACCATCAAGGTAAAGCTGCAGAGCCAGCCTACGCCAGTACCCGGTCAGTCTCCAAAGTATTCAGGTGCAATTGATGCTGTGAAGAAGACAGTAGCAGCTGAAGGTCCAAGAGGCTTGTACAAAGGTATGGGGGCCCCACTTGCAACCGTTGCAGCCTTCAATGCCGTGCTGTTTACGGTTAGAGGACAGATGGAAGCATTGGTCAGGACCCAACCTGGTGCTCCCCTCTCAGTTAGCCAGCAGTTTGTTTGCGGCGCCGGCGCCGGCGTTGCTGTTTCCTTCCTTGCTTGCCCCACTGAACTTGTCAAATGCAGGCTGCAAGCACAAAGCGCACTTGCTGGGACCGGAACAGCGGCGGTGGCTGCCGTGAAGTACGGAGGACCAATGGACGTGGCGAGGCAAGTTCTAAGATCAGAAGGCGGCATGAGAGGGCTTTTCAAAGGTTTGATTCCGACCATGGGCCGCGAGATACCGGGAAACGCCATAATGTTTGGTGTCTATGAAGCAATCAAGCAAATGCTTGCAGGGGGCCCTGACACTTCCGGACTAGGCAGAGGATCTCTGATTCTAGCCGGCGGCGTGGCCGGAGCCTCCTTTTGGTTCTTGGTGTATCCAACCGACGTTGTTAAGAGTGTGATCCAAGTTGATGATTACAAGAACCCAAAGTTTTCTGGCTCCTTTGATGCTTTTAGAAAGATTCAAGCTTCWGARGGTTTAAAAGGCCTTTATAAGGGTTTCGGWCCGGCCATGGCGCGAAGCGTTCCGGCCAACGCCGCCTGCTTCTTGGCATATGAGATGACAAGATCAGCTCTTGGATGA 909 0.5446 MLLQMGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPTPVPGQSPKYSGAIDAVKKTVAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEALVRTQPGAPLSVSQQFVCGAGAGVAVSFLACPTELVKCRLQAQSALAGTGTAAVAAVKYGGPMDVARQVLRSEGGMRGLFKGLIPTMGREIPGNAIMFGVYEAIKQMLAGGPDTSGLGRGSLILAGGVAGASFWFLVYPTDVVKSVIQVDDYKNPKFSGSFDAFRKIQASEGLKGLYKGFGPAMARSVPANAACFLAYEMTRSALG* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0024 302 Pfam Mitochondrial carrier protein 106 205 IPR018108 -
Amo11g0024 302 Pfam Mitochondrial carrier protein 219 301 IPR018108 -
Amo11g0024 302 Pfam Mitochondrial carrier protein 8 98 IPR018108 -
Amo11g0024 302 SUPERFAMILY Mitochondrial carrier 7 295 IPR023395 -
Amo11g0024 302 Gene3D Mitochondrial carrier domain 4 301 IPR023395 -
Amo11g0024 302 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 5 302 - -
Amo11g0024 302 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 300 IPR018108 -
Amo11g0024 302 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 97 IPR018108 -
Amo11g0024 302 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 5 302 - -
Amo11g0024 302 ProSiteProfiles Solute carrier (Solcar) repeat profile. 106 203 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0024 Amo-Chr11 198394 200374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0024 26 296 Antiporters AT1G79900 32.852 7.81e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0024 K15109 - gmx:100791908 522.702