Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0023 ATGTTTTTGGAGAAATATTATGGATTAAYAAAATCCATCAAGTTSATTTCCTCTGCCAAGAAMAAGYCCTCCAAGTTTGAAATTCTATTGGGAAGTTGGTATTTTTTTTTAATCAAAATAATTTTTTTTCTTGGTACAAAAAAAATGAGTTGCTTTGCATGGTGTAATACATCAGACCCAAGGATTAAGAGGTCATTAAGGAGAAGCATTGGGGATTACCATGGAGGAAAAACTCTTGCAGCATTTGCCAACATGTCTTTTAAAACTGATAGTGGCAAGAGAAAATTTATAGAGGAGATAGCAAGACTTGGAAAAGGGAATATTACCTCAAAAGCTTTTTCATTTAGAGAACTSTGTGCTGCAACTCAAAACTTTCACCCTTCCAATGTGATTGGTGAAGGAGGCTTTGGTAGGGTTTACAAAGGATACCTTAAAAGCACAGATCAAGTTGTTGCTGTGAAGCAACTTGACAGGAATGGATTTCAAGGGAATAGGGAATTTTTTGTTGAGGTTTTGGTTTTGAGTCTTTTGAAACACCCTAACCTTGTCAACTTGGTAGGTTATTGTGCTGAAGGTGAACAAAGGATTTTGGTGTATGAATACATGGTTAATGGTTCTTTAGAGGATCATTTACTTGACATCGATCCAGACAGAACACCATTGGATTGGCAAACTAGAATAAAAATTGCAGAAGGTGCAGCGAAAGGACTCGAATACTTGCACGAAATAGCAAATCCTCCGGTAATATACCGTGATTTTAAAGCATCAAATATTCTTTTAGACGAAAATTTCAATCCAAAACTATCTGATTTTGGACTCGCCAAAGTTGGTATACTTGGTGATGAAATGGCACAAGTATCCACAAGGGTCATGGGAACCTATGGCTATTGCGCACCCGAGTATGCATCCACAGGACAATTGACTATAAAATCAGATGTTTATAGTTTTGGAGTTGTGTTCTTGGAAATGATCACAGGAAGAAGAGTCATTGATAATTCGCGAAAAACAGAGGAAGCAAACTTAGTCCTTTGGGCACAACCACTTCTAAGAGACAGAAGAAAATTTGTACAAATAGCAGATCCATTGCTAGAAAATAAATACCCCATAAAGGGTTTGTACCAAGCTCTAGCAATAGCAGCAATGTGTCTTCAAGAGGAAGCTGAAACAAGGCCATGGATCAGTGATGTGGTTACTGCTCTTTCCTTTTTAGCAACCAAGAAGGTGGATGGAGACGCTTCCTTAAATGACAATTGTACTCAAGTTTAA 1266 0.3728 MFLEKYYGLXKSIKXISSAKXKXSKFEILLGSWYFFLIKIIFFLGTKKMSCFAWCNTSDPRIKRSLRRSIGDYHGGKTLAAFANMSFKTDSGKRKFIEEIARLGKGNITSKAFSFRELCAATQNFHPSNVIGEGGFGRVYKGYLKSTDQVVAVKQLDRNGFQGNREFFVEVLVLSLLKHPNLVNLVGYCAEGEQRILVYEYMVNGSLEDHLLDIDPDRTPLDWQTRIKIAEGAAKGLEYLHEIANPPVIYRDFKASNILLDENFNPKLSDFGLAKVGILGDEMAQVSTRVMGTYGYCAPEYASTGQLTIKSDVYSFGVVFLEMITGRRVIDNSRKTEEANLVLWAQPLLRDRRKFVQIADPLLENKYPIKGLYQALAIAAMCLQEEAETRPWISDVVTALSFLATKKVDGDASLNDNCTQV* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0023 421 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Amo11g0023 421 Pfam Protein kinase domain 126 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0023 421 Gene3D Phosphorylase Kinase; domain 1 88 201 - -
Amo11g0023 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Amo11g0023 421 PANTHER OS07G0668900 PROTEIN 52 409 - -
Amo11g0023 421 CDD STKc_IRAK 131 400 - -
Amo11g0023 421 ProSiteProfiles Protein kinase domain profile. 125 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0023 421 SUPERFAMILY Protein kinase-like (PK-like) 109 398 IPR011009 -
Amo11g0023 421 Gene3D Transferase(Phosphotransferase) domain 1 202 419 - -
Amo11g0023 421 PANTHER RECEPTOR SERINE/THREONINE KINASE 52 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0023 Amo-Chr11 192752 196628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0023 107 414 Glycoside Hydrolase AT3G07070 68.506 1.41e-152 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Amo11g0023 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0023 - - gmx:100790474 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0023 11 192752 196628 Amo11g0023 11 192752 196628 ECH