Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0016 ATGATTTGCTCTTTGAGACAACCTAGTATAGGGATCACTGGTTCTGATGTTGTGTTGAGGCAAAAACACGCAACCCCATTTCAAGCATGTTCATTTTTACCTCCTTTGMCYTTGAAGAAAAAACCCCAGAAACATGTTGTTTCGGTGAACAAACCACTGCACGTTGCTTCTGTTAGTGTTGGGAATTTTGGGTCAGTGAAGGASTTMGAGGGTTTTGGAAAGAGAGAGAGRGATGATTTGGTGAAGTGTGGTGCATATGAGGCAGATAGATCAGAGATTGAAGCAGCTGGTCCATCAGAGGCTGCAAAGAAGGTGAAGATTGGGATATACTTTGCAACATGGTGGGCTTTGAATGTTGTGTTCAATATATATAACAAGAAGGTGTTGAATGCATACCCTTACCCTTGGCTCACATCAACACTTTCACTTGCTTGTGGCTCTCTCATGATGTTGATCTCTTGGGCCACAGGGATTGCTGAATCCCCTAAGACTGATCTTGAGTTTTGGAAGACTTTGTTACCTGTTGCTGTTGCACACACAATAGGACATGTCGCGGCGACTGTTAGTATGTCGAAAGTTGCAGTGTCTTTTACACATATCATCAAGAGTGGTGAACCTGCSTTTAGTGTCTTGGTTTCCAGATTTCTCCTTGGTGAGACCTTTCCCGTGCCGGTCTATCTATCTTTGATTCCAATTATTGGTGGATGTGCACTTGCCGCTGTTACCGAGCTCAATTTCAATATGACTGGTTTCATGGGGGCTATGATATCAAATTTGGCATTTGTGTTCCGTAATATCTTTTCGAAGAAGGGCATGAAAGGAAAGTCTGTCAGTGGAATGAATTACTACGCATGCTTATCTATTTTATCCCTTGCACTTCTCACACCATTCGCAATAGCCGTCGAAGGGCCGCAGATGTGGGCAGCTGGATGGCAAATAGCACTCTCTCAAATCGGACCCCAATTCATATGGTGGGTAGCAGCTCAAAGTGTGTTCTACCATCTGTACAACCAAGTGTCATACATGTCTTTGGATGAGATCTCGCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATTTCAGTCATAGTTTCTTCCATCATTATCTTCCATACACCAGTTCAACCTGTCAATGCTCTTGGAGCTGCGATAGCTGTCCTCGGAACCTTCTTATATTCACAGGCAAAACAATAG 1197 0.4319 MICSLRQPSIGITGSDVVLRQKHATPFQACSFLPPLXLKKKPQKHVVSVNKPLHVASVSVGNFGSVKXXEGFGKRERDDLVKCGAYEADRSEIEAAGPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATGIAESPKTDLEFWKTLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLALLTPFAIAVEGPQMWAAGWQIALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAVLGTFLYSQAKQ* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0016 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 241 - -
Amo11g0016 398 PANTHER SOLUTE CARRIER FAMILY 35 39 397 - -
Amo11g0016 398 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 106 397 IPR004696 GO:0016021|GO:0022857|GO:0055085
Amo11g0016 398 Pfam Triose-phosphate Transporter family 106 394 IPR004853 -
Amo11g0016 398 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 39 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0016 Amo-Chr11 123361 126880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0016 42 397 Antiporters AT5G54800 79.670 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0016 K15283 - gmx:100801832 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0016 11 123361 126880 Amo11g0016 11 123361 126880 ECH