Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3475 ATGAACAAGTTAATGACTCTGGATTTGGGTAAACCTTCTCATATAACAAACAACCTTGCATCCCTTCTTGGAAATGGCATTCTCAGAGCTAATGGACTTAATTGGTCCCATCAGAGAAAACTTATTGCTCCTGAGTTCTTCATGGAAAAAGTTAAGGGTATGGTGGACCTAATGATAGAGTCAACGCAACCATTATTAACAAAATGGGACAAAGCCATTAAGGCCAAATTAGGTAATGATGTTGATGATGGCAATGGCGAAGTTGAAGTTGAAGTTAATGAAGATTTGAGGAGCTTAGCAGCTGATGTTATTTCAAGAGTTTGTTTTGGACATTCATATTCCAAAGGAATTGAAGTTTTCTCTAAGCTTAGGCTAATGCAAAAGAAAATGTCCAAACATGGTACCTTCCTTTTTGGAGTCAAAGGTTTAAGGGATACTCTAAACAATGTATGGAGAGGGAAGGAAAATGAGATTAAAATTATGGAGAGGGAGGTAGAGTCACTAATTTGGGAGTTAGTGGAGGAACGAAAGGAAGAATGCTCAGAGAAACCTTCTTCAAAGAAAGATCTAATGCAATTATTATTGGAAGCAGCTATGAGTGATGATGATTCAACAAGTCTACCTAAAGATTTTGCCAAGCAATTCATTGTGGATAATTGCAAGAACATATACTTTGCTGGCCATGAAACCGTTGCAATAACTGCTTCTTGGTCTTTGATGCTTCTTGCTACTTATCCAGAGTGGCAAGATCGTGTAAGAAAAGAGGTTGTTCAAGTTTTCCCCAATGGCATTCCAAATGTTGATTCTCTTCCTCTCTTGAAAACGTTGACTATGGTGATACATGAAGTGCTACGCTTATACCCACCAGGAGCATTTGTTTCAAGAGAGGTCTATAAAGATACACAAATTGGAAAACTACTTGTTCCCAAAGGTGTTGTTTTATGGACCCTAATTCCAACTATACATAGGGATCCTGAAATTTGGGGAGCAAATGCAAATGAGTTTCAACCTGAAAGATTCAAAGATGGTGTCTCTAAGGCTTGCAAGTATCCACAAGCATATGTGCCTTTTGGAGTGGGTCCTCGCTTGTGTGTTGGGAAAAACTTTGCAATGGTTCAATTGAAGGTTGTTCTTGCCCTAATTCTCTCTAGGTTTAGATTCTCTCTATCTCCTAGCTACAAGCATGCTCCTGCTTATAGAATGATTATAGAACCAGGGCATGGTGTGCATCTTCTTATTCAAAAGATATGA 1251 0.3853 MNKLMTLDLGKPSHITNNLASLLGNGILRANGLNWSHQRKLIAPEFFMEKVKGMVDLMIESTQPLLTKWDKAIKAKLGNDVDDGNGEVEVEVNEDLRSLAADVISRVCFGHSYSKGIEVFSKLRLMQKKMSKHGTFLFGVKGLRDTLNNVWRGKENEIKIMEREVESLIWELVEERKEECSEKPSSKKDLMQLLLEAAMSDDDSTSLPKDFAKQFIVDNCKNIYFAGHETVAITASWSLMLLATYPEWQDRVRKEVVQVFPNGIPNVDSLPLLKTLTMVIHEVLRLYPPGAFVSREVYKDTQIGKLLVPKGVVLWTLIPTIHRDPEIWGANANEFQPERFKDGVSKACKYPQAYVPFGVGPRLCVGKNFAMVQLKVVLALILSRFRFSLSPSYKHAPAYRMIIEPGHGVHLLIQKI* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3475 416 Pfam Cytochrome P450 14 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3475 416 Coils Coil 158 178 - -
Amo10g3475 416 SUPERFAMILY Cytochrome P450 14 413 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3475 416 PANTHER CYTOCHROME P450 714A1-RELATED 1 411 - -
Amo10g3475 416 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 357 366 IPR017972 GO:0005506|GO:0016705
Amo10g3475 416 Gene3D Cytochrome P450 7 416 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3475 416 PRINTS E-class P450 group I signature 99 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3475 416 PRINTS E-class P450 group I signature 364 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3475 416 PRINTS E-class P450 group I signature 235 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3475 416 PRINTS E-class P450 group I signature 354 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3475 416 PRINTS E-class P450 group I signature 215 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3475 416 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 411 - -
Amo10g3475 416 PRINTS P450 superfamily signature 278 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3475 416 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3475 416 PRINTS P450 superfamily signature 355 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3475 416 PRINTS P450 superfamily signature 226 243 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3475 Amo-Chr10 100579650 100583285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3475 1 409 Cytochrome P450 AT5G24900 50.122 1.08e-157 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3475 K20661 - gmx:100818766 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g3475 10 100579650 100583285 Amo20g2286 20 106618180 106621972 hybridization
Amo10g3475 10 100579650 100583285 Amo20g2284 20 106348510 106353678 hybridization