Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3474 ATGAGGAACCCTACATGTTGTTGTGTTGTTCAGCTTGTAATTCAAGCTGTGGTGGTGCTTTTGCTGGCTTTGTTATGTGGAGGCTCAGAACGAGAAGCCAAGGCCTTACTTAGGTGGAAAGAAACCCTCCCAGCCCAACCAATTCTTGATTCATGGGCTTTTCAAGCTCAAACTCAAAGCCCGTGTTCATGGAGAGGGATCACTTGTGATTCTCAAGGCAGTGTGGTTGTCATAAACTTAGCATACACCGGACTTACAGGTACCCTTGAAAACTTAGACTTCACTGCTTTTCCCAACCTCCTACGACTTGATCTCAAAACAAATAATCTTAGAGGCACCATACCCCAAAACATTGGGATACTCTCAAAACTTCAATTCCTTGACCTTTCCACCAATTCTCTCAATGGCACTTTACCTCTTTCTATTGCAAATCTCACCAAAGTCTATGAGCTTGATGTGTCAAGAAATAACATAACAGGAACACTAGACCCTCGCTTATTTCCTGATGGAACCAATGAGCCAAGAACTGGCCTCATTAGCATCAGGAATTTCTTGTGTGAAACAACCCTTTTAGGTGGAAAAATTCCAAATGAAATAGGCAACATAAAAAACTTGACATTGCTAGCTTTAGATGATAACAACTTTTATGGGCCTATACCTCCATCTCTAGGAAATTGCACACATTTAAGTGTTCTTAGAGTGAATCAAAACCATTTCTCAGGTACAATACCTTCTAGTATTGGCAAGTTAACAAATCTAACAGACTTGCGGTTTCAAATCAACAACTTAACCGGCACGGTGCCACGAGAATTCGGAAACTTGTCTTCATTAGTTGTACTTCATCTGGCTGAAAACAACTTTGTTGGAGAATTGCCACCTCAAGTGTGCAAAGGTGGAAAGCTTGTCAACTTCAGTGCAGCACACAATAGTTTCACCGGTCCAATCCCAAGAAGCCTTAGAAACTGCCCAACATTGCATCGAGTTCGAATCGAGTACAATCAGTTGACAGGCTATGCAGATCAAGATTTTGGAGTGTATCCGAACCTCACTTACATTGATTTCAGTTACAACAGGATTCGAGGCCGGTTATCTGCGAAATGGGGTGCCTGCAAGAACTTGCAACTACTTAAAATGGCTGGCAATTCCATAAGAGGCTTTATTCCAGAAGAGATTTTTCAACTGAAGCAGTTAGAAAGTCTTGACCTGTCCTATAATCAAATCTCAGGGAAGATTCCTTCACAAATTGAAAATGCAAGTCGCTTGTATGAATTGAAGTTGGGTGGCAACAAACTTACTGGTATGACACCAGAAGAAATTGGAAAGCTTTCTAATTTGGTGAACTTAGACTTGTCCAAGAACATGTTGTTTGGACCAATCCCAAATCAGATAGGGGATTGCACCAACTTGAATCTCTCTCACAACAATCTCTCCGGTCGAATCCCCAAGTCCCTTGGTGAAATGTTGAGCTTGTTAACCATCAACCTCTCTTACAATCATCTGGAAGGCCCTGTGCCTAGAAATGGCATATTCAACTCTTCACTTCTTCCAATGGATTTGAGAAACAACAAAGGTTTATGTGGCAATATCCAAGGTTTGCAACATTGTGAAGACTCAGTCACTGAACCTGTTGATGGAAGTAGTAAAAGAAATGAAATAGTAATACTTTCTGCTGTTACATTGGGAGGTATTTTGTTTCTTTCATTGGTGTTAGTTGGGATTTTGTGCTTCAAGAAAAAGCCAAAATCAACAGTTTCAAAACAAAACTTTTCAGCAAGCATGAGAGAAAATCAAAATCTGTTTTCAATTTGGTCATTCGATGGCAAAATTGTCTACAGAGATATAATTGAAGCTACCAACAACTTTGACAGCCGTTGCTGCGTCGGCGAGGGAGCGATCGGGAGAGTTTACAAGGCAGTTATCAAAGGAGGCCAACAAGAAGAAGTATTTGCTGTGAAAAAGTTGAAATGTGAATCAGAAAGCTTAGATGTTGAGAGTATAAAATCCTTCCAGAGCGAAGTGGAAGCCATGAGAGAAACGCGCCATAGAAACATTGTGAAACTCTATGGATTCTGCTCTAACAAGACACACACATTCTTGATCTATGAGTATTTGGATCGAGGGAACTTAGCTGAGATGCTTGGAAATGATATCAAAGCATTGGAACTAGATTGGCCTAAGAGGGTGAACATTATCAAAGGCGTTGCGCATGCTTTGTCCTATATGCATCATGATCACACTCCTCCATTGATTCATAGAGACATATCGAGCAAGAACATTTTGCTGTCCTCCAATCTTGAAGCTCGTGTCTCCGATTTCGGCACTGCTAGGTTCTTGAAGCCAGATTCATCGATTTGGACGTCGTTTGCAGGCACATATGGCTATGCTGCTCCAGAACTCGCTTACACGATGTTGGTGACTGAGAAATTGGATGTGTTCAGCTTTGGCGTTTTGGCCTTAGAAGTTATTTCAGGAAAGCACCCCGGTGATGTTGTTCTTCACATAAAAGCTTCTAGTCAATCAAGTATAAACATGATTGAAGTTTTAGACCCACGCCTCTCACATCCAACCAATGAACATATTCTGAAAGAGTTGACCTCGATTGCAAATCTAGCAGACCTACACCACTCCCTCCGCCCTTTCACAGCCACCGCCTTTTCCCACTTCCCTTCCACCTCCTCCTCTCCCCCTCCGCCACCTCCCGGTTCTAACCCCCACCGCGTTCTCCCTCTCCGGCGCTTCCCAACCGTCATCATTGGAATCCTATCCCTCCCAAACCACACTGCTCCGTCCTCTTTCCCTTGCTCCTGCTTCCAATTCTCCGATGACTCCGCCTCCGTCTGCTGCGACCTCCTCCAATTCCAACCTTATGCTTTAGGCAAGCAAATCCGCGTCACAGCTTGGAACTTTGTTCCCTTTAAGTGCCATGGAAAGAGCCGTGCGGGCTTCTTGGAGATCATCAAATGGTGTTTTCTTGATCCCAACGAAGAAGCAAACCAAATGGATTCTATTCCGCTTGTGCCGAATCGAAGTTGCGGCAGCTACGGGAACAACTCCAAGGCTCGTTATCGACTCTACGGAGTGGTGGAGTCGGTTGGCCCTGTTTCCGTTGTCCCTTGTGCAATGGTTGCTAGTGTATCCGATTCGGATTTGAATTCGAGTTCTAAAGTGAAAATGTTAGGGTTTGTGGTTCAATTGATGCGTTGTGAGTGCAGGTTATGCGGTTCCAAAGAGTTAATAAGCGATCTAGAGAGTGGGAGTGGTCATTCTTTTACTAAAAAGGAGACAGTGTATTTTTGTGGAGGTGCTTCCCCTTGGCACCCTGCAATGACTAAGCTAATTGGTAACCGAGTTATGGTGTCGCGGCTAAAGAAGAAGTTGGCTTTCATAACGAAGGAGGACTCTTGGGTTATGTATGTGACCGTGGATGTCTCGGTTCTTCATGTGTGTCGAGTTTCCAAGAAATGGCTACCCTGCTTGAAGAGTGATATGAAGATGAAGGGTGAATGTGGCACGTACACTGGCGTAATCAAAGGTGTCTACATGCAAGGAATGGCTTTGGAGTTGGACCACGATGTTTGGCTTCTTTTAACGGATGAACTGCATACTCTGATGCATGGTTTGAGAGTTGGAGCTGTTGTATCTGTGAGAAATGTGCATTTTGTGGATCCACAGTTTTCATGGACAAAAATTGTAATTCTTGGAGCCTGCGTCAATACGAGCATCATTGTGGAATCATTCTCCCCATTGGAAACTGCGTGTAATGTAGTTTTGAAATCTCAGAGTATGCTTGGACAGTTCATTCAGTCATTACCATTTTCRGCAAGACTCTGGCTATTACTTCTTYTCTCAAGCTTACGTAAAATGTTTGCTGGTAGCTTAAGCGACAAGGAGATTTTGGGATCCAAACATGAAGAAGGGCTTGCTCAGATGTATGCCAGTTCACTGCTTCCTCCATCAGTGTTTCAATCAGAGGTAATACCAGCATCTGTGTTCATCCATCACTGTATAGATACCATAGAGAGAACTCTAAAATCAGAAAACCGCTGTAAATTATTGCCTGCTGGCAACCATTCCAGAGTTTTACCTCATCTAGCAAGATATAGTAGCAGACCAGGGAGGAAGATTATTCCTGGCAAAGATGTAGGCGTTACTTTGCTTGGACATCTAAAGATTAATCCGTTGACTACCAGACTGCAGCTGGTTGATGCGACTGGTGGCATTGATGTTCTTATTCCAGACCTTCCCTTAATTTGGAATGCTGAAGAAATATACGAGGTGTCAGAGTATGATATTTTTGTGGACGGCATAGGTGAACTTGGGGATAGCTTGGAATTGCTTGAGATTGAGTCATTATCATGCAGAACGATCTTTAATTACGTTCAACCAGCCAGAGAGAGGGAGTTAAGCAGCTCAATTTTTGTTTACTTTCATTGGAGCAATGCAAAATGCCGAAAATTTCCCCATTACCCTTGTAGAGATAAGAAAAATGAAAGTCTGGTGCCCAAGCCTGGATGCTACCATTTGCTTAGGGTATCTCACAAATTTCCCCTGCAAGGGAAGTATTCTAATATCATGAAATCAGACAAGTCAAATACTTTTGTTGAAGCGAAAGTTTTGCCATTTGATTTGTTGCTTTCTGAGAAGAGAGAAATTTTGCATTCATATAATGTTTCAAGGGATAAGACCAAGGAAGTCTCCGATTATTTAATTAATGGTAATAATGAGGAGCAAGTATGGTCCAATAAGAGGCAGAAACTTGATAAGGAATCAGCATGTGCATCGAAGGATGACTTTTTCACTTCCATTAATGAGCTGAGAGCTTGTTCCAATTTGTTGAATATATCAAAAGAGAACAAAAGAAGTTTTGATTTGAGTTCTGATGACATATCGTGTCTAGCCAATTTTAGAAGGCTACAACATGAGAATGTGATTTGTACTGCTGTTGTGCGCTCTAAATCATCTACAAAGAGTTTTGACTCGAAATCAAATGCAAGGAAAGTTTTGCTAGAGTTCTCATTAGATAGATTTTTCACGTATCAGTCATTGAAGATTGGTGATTGTTACATCATAGAGCATTGTACAAAAGACTGCTTTTGCAATATGAAAGATGCTGGCTTTGGTAGCCGTGCTAAATTTCGTGTTGGTTCTGGGAKACTAATCTTCAGCATTTCATTCATATCTGGAAAAGATTCTGTTTCTCCTAGCGCTGATGMGATTTTGACTAAAGAGCAAATTGAAGGATTTTTGCTAAGATCCAATGTTGATTCACCAGATGTCTCTTCAGATGTTTGTCTGTATCTCCCTGTCAACCTCACAGATCTCCTGGATGTTAACATTATCGAATCAGAGTACAGTGAAATGCATAAATATGCAGTATCAGAAGAGAGTGCTAATGTTTCTGTGGGCCCTGGGATTGTAGCAGGAAGGACTAATCTTTGTTGTGGTTCTCAAAATTCAAACTTCYTGTTTCCCGAGGGAAATTTGATTTCTCTTGAGGGTGATGTGGTTGACATTCATGATATTGGCTCTAGTTTAAGCAATGCATGTTCAAGTGCTGCAAGCCTTGACTCTCTTCAGTTGAAAGGCCTTATTCAAAATAGAAAAAGTCTCTGCATTCATGTATTAGTGCATAAACATATGGTGAAGATATTTGGTTCTATAAGCAAGCATGCTTATCCAATTGGTTTTGGACCTGGTGTAACCGCAACATTTCATCGAATCCTTGATGCGAGGTCCGAGAATAAATTCATGTTACTGCCTGTATCATTTATTGTGATAAAGTCAATTAAAGTACATGATAAACAGTGCACTGACTGGTCCTTCAATTTAAGCCTTCTTAAAGATGCATACAATCCATCTCCAGATTCTGTCTCTTGTTTGATCTCTCAGTTGCATCAGTGCTCCAGTAACAAGCAAATAATGCTTCGGTGCAGGGTTGTCGCAGTCTTTATTTTAGTTCTTGAGAGGAACACTACTGCTTTTGACATTCCACTTGCTGGTTTTCTGTTGGATGATGGATCATCGTCATGTTGTTGCTGGGCCAATGCTGAAAGGGCGGCAGCCTTGTTGAGACTACATGAAGAACCCACCACATCTTGTAATCTAGGGAGAATTTTGAAGAATTATCAGAAAATTACTGTGAAAAACCAAGGGTTATTTATTGAGTCACCTTTTCAAGATCTTGCTGTATCTGTTACTTCTGGCAACGCCGTTTACCAATATGACGAAAACACCCTCAAATTCATGATCTTCAACGCGTGTGCTGGTAGAGTATGGAATGTAGTTGCTAGTCTGATGGATGCAGAGGAAGTTAGACAGTTGGACAATGAATACCTCACCGAAACAACGAATCTGCGAAGCTTACGGAATATATGGGCCAACGAAGTTTCTTGCCCCCGCATGCTGGCTGAGGCAAAGAACATGCTTCAGGAACTTCGGAGAAGTTCGTGCTCATAA 6456 0.4185 MRNPTCCCVVQLVIQAVVVLLLALLCGGSEREAKALLRWKETLPAQPILDSWAFQAQTQSPCSWRGITCDSQGSVVVINLAYTGLTGTLENLDFTAFPNLLRLDLKTNNLRGTIPQNIGILSKLQFLDLSTNSLNGTLPLSIANLTKVYELDVSRNNITGTLDPRLFPDGTNEPRTGLISIRNFLCETTLLGGKIPNEIGNIKNLTLLALDDNNFYGPIPPSLGNCTHLSVLRVNQNHFSGTIPSSIGKLTNLTDLRFQINNLTGTVPREFGNLSSLVVLHLAENNFVGELPPQVCKGGKLVNFSAAHNSFTGPIPRSLRNCPTLHRVRIEYNQLTGYADQDFGVYPNLTYIDFSYNRIRGRLSAKWGACKNLQLLKMAGNSIRGFIPEEIFQLKQLESLDLSYNQISGKIPSQIENASRLYELKLGGNKLTGMTPEEIGKLSNLVNLDLSKNMLFGPIPNQIGDCTNLNLSHNNLSGRIPKSLGEMLSLLTINLSYNHLEGPVPRNGIFNSSLLPMDLRNNKGLCGNIQGLQHCEDSVTEPVDGSSKRNEIVILSAVTLGGILFLSLVLVGILCFKKKPKSTVSKQNFSASMRENQNLFSIWSFDGKIVYRDIIEATNNFDSRCCVGEGAIGRVYKAVIKGGQQEEVFAVKKLKCESESLDVESIKSFQSEVEAMRETRHRNIVKLYGFCSNKTHTFLIYEYLDRGNLAEMLGNDIKALELDWPKRVNIIKGVAHALSYMHHDHTPPLIHRDISSKNILLSSNLEARVSDFGTARFLKPDSSIWTSFAGTYGYAAPELAYTMLVTEKLDVFSFGVLALEVISGKHPGDVVLHIKASSQSSINMIEVLDPRLSHPTNEHILKELTSIANLADLHHSLRPFTATAFSHFPSTSSSPPPPPPGSNPHRVLPLRRFPTVIIGILSLPNHTAPSSFPCSCFQFSDDSASVCCDLLQFQPYALGKQIRVTAWNFVPFKCHGKSRAGFLEIIKWCFLDPNEEANQMDSIPLVPNRSCGSYGNNSKARYRLYGVVESVGPVSVVPCAMVASVSDSDLNSSSKVKMLGFVVQLMRCECRLCGSKELISDLESGSGHSFTKKETVYFCGGASPWHPAMTKLIGNRVMVSRLKKKLAFITKEDSWVMYVTVDVSVLHVCRVSKKWLPCLKSDMKMKGECGTYTGVIKGVYMQGMALELDHDVWLLLTDELHTLMHGLRVGAVVSVRNVHFVDPQFSWTKIVILGACVNTSIIVESFSPLETACNVVLKSQSMLGQFIQSLPFSARLWLLLLXSSLRKMFAGSLSDKEILGSKHEEGLAQMYASSLLPPSVFQSEVIPASVFIHHCIDTIERTLKSENRCKLLPAGNHSRVLPHLARYSSRPGRKIIPGKDVGVTLLGHLKINPLTTRLQLVDATGGIDVLIPDLPLIWNAEEIYEVSEYDIFVDGIGELGDSLELLEIESLSCRTIFNYVQPARERELSSSIFVYFHWSNAKCRKFPHYPCRDKKNESLVPKPGCYHLLRVSHKFPLQGKYSNIMKSDKSNTFVEAKVLPFDLLLSEKREILHSYNVSRDKTKEVSDYLINGNNEEQVWSNKRQKLDKESACASKDDFFTSINELRACSNLLNISKENKRSFDLSSDDISCLANFRRLQHENVICTAVVRSKSSTKSFDSKSNARKVLLEFSLDRFFTYQSLKIGDCYIIEHCTKDCFCNMKDAGFGSRAKFRVGSGXLIFSISFISGKDSVSPSADXILTKEQIEGFLLRSNVDSPDVSSDVCLYLPVNLTDLLDVNIIESEYSEMHKYAVSEESANVSVGPGIVAGRTNLCCGSQNSNFLFPEGNLISLEGDVVDIHDIGSSLSNACSSAASLDSLQLKGLIQNRKSLCIHVLVHKHMVKIFGSISKHAYPIGFGPGVTATFHRILDARSENKFMLLPVSFIVIKSIKVHDKQCTDWSFNLSLLKDAYNPSPDSVSCLISQLHQCSSNKQIMLRCRVVAVFILVLERNTTAFDIPLAGFLLDDGSSSCCCWANAERAAALLRLHEEPTTSCNLGRILKNYQKITVKNQGLFIESPFQDLAVSVTSGNAVYQYDENTLKFMIFNACAGRVWNVVASLMDAEEVRQLDNEYLTETTNLRSLRNIWANEVSCPRMLAEAKNMLQELRRSSCS* 2152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3474 2151 Gene3D Ribonuclease Inhibitor 28 171 IPR032675 -
Amo10g3474 2151 ProSitePatterns Tyrosine protein kinases specific active-site signature. 749 761 IPR008266 GO:0004672|GO:0006468
Amo10g3474 2151 MobiDBLite consensus disorder prediction 891 905 - -
Amo10g3474 2151 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 469 - -
Amo10g3474 2151 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 468 872 - -
Amo10g3474 2151 ProSiteProfiles Protein kinase domain profile. 621 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3474 2151 MobiDBLite consensus disorder prediction 887 906 - -
Amo10g3474 2151 Gene3D Transferase(Phosphotransferase) domain 1 704 887 - -
Amo10g3474 2151 Gene3D Phosphorylase Kinase; domain 1 581 703 - -
Amo10g3474 2151 SMART LRR_sd22_2 394 420 - -
Amo10g3474 2151 SMART LRR_sd22_2 442 461 - -
Amo10g3474 2151 SMART LRR_sd22_2 121 147 - -
Amo10g3474 2151 SMART LRR_sd22_2 250 276 - -
Amo10g3474 2151 Gene3D Ribonuclease Inhibitor 256 538 IPR032675 -
Amo10g3474 2151 Pfam Protein kinase domain 627 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3474 2151 Gene3D Ribonuclease Inhibitor 172 255 IPR032675 -
Amo10g3474 2151 ProSiteProfiles Leucine-rich repeat profile. 396 418 IPR001611 GO:0005515
Amo10g3474 2151 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Amo10g3474 2151 SUPERFAMILY Protein kinase-like (PK-like) 612 898 IPR011009 -
Amo10g3474 2151 Pfam CST, telomere maintenance, complex subunit CTC1 913 1211 IPR028262 GO:0000723
Amo10g3474 2151 SUPERFAMILY RNI-like 72 292 - -
Amo10g3474 2151 SUPERFAMILY L domain-like 236 535 - -
Amo10g3474 2151 SMART serkin_6 621 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3474 2151 SMART LRR_typ_2 250 273 IPR003591 -
Amo10g3474 2151 SMART LRR_typ_2 145 169 IPR003591 -
Amo10g3474 2151 SMART LRR_typ_2 442 466 IPR003591 -
Amo10g3474 2151 SMART LRR_typ_2 274 298 IPR003591 -
Amo10g3474 2151 SMART LRR_typ_2 121 144 IPR003591 -
Amo10g3474 2151 SMART LRR_typ_2 394 418 IPR003591 -
Amo10g3474 2151 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 9 469 - -
Amo10g3474 2151 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 468 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3474 Amo-Chr10 100520730 100538633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3474 10 797 Receptor kinase-like Gene Family AT4G08850 37.607 1.80e-179 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo10g3474 CTC1_2 2e-89 CL0586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3474 - - gmx:100816348 1413.67