Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3468 ATGCAATTCACAAGAGCTTCTTCAATGGCTGGCTCATGCTTCCATGGGCTTCGCATGCGAAGYTCYAAGAGTAAGCCTTTACCGGAGCTTCCTCCTTCATCGTCTTCCAAGAAAAGGATGAARTCTGACTTAGAGAACATGGAGAGAAAGAGATTTGACAGCTTGGAATCATGGTCCATGATATTGGACTCTGAGAATGTGGAGACATGGGAAGCTTCTAAGGAGGATCAGGAGGAGTGGACTGCAGATTTGTCACAGCTTTTCATAGGGAACAAGTTTGCATCTGGAGCTCACAGTAGAATCTACCGTGGAATTTACAAGCAGAGAGCCGTAGCTGTGAAAATGGTGAGGATCCCGACACAGGACGAGGAGAGAAGATCCTTGCTTGAGCAGCAGTTCAAATCTGAAGTTGCTTTGCTTTCACGTCTCTTTCARCCYAACATAGTTCAGTTTATTGCAGCTTGTAAAAAACCGCCAGTGTACTGTATCATAACAGAATACATGTCACAAGGAACTCTGAGGATGTATCTGAACAAGAAAGAGCCYTACTCTCTTTCAATTGAAACAATACTAAGGTTAGCTCTTGACATATCTAGGGGTATGGAGTACCTTCACTCGCAAGGCGTCATCCACAGAGATCTCAAGTCAAATAACCTTCTTCTCAATGATGAGATGAGGGTTAAGGTGGCAGATTTCGGCACATCTTGTCTCGAAACAAGGTGRCGWGAGACCAAAGGAAACATGGGAACGTATCGTTGGATGGCGCCAGAGATGATTAAGGAGAAACCTTACACTCGCAAAGTTGATGTGTATAGTTTTGGTATTGTGCTTTGGGAACTCACAACTGCTTTACTTCCCTTCCAAGGAATGACCCCTGTCCAAGCTGCTTTTGCTGTTGCTGAGAAGAATGAGAGGCCACCACTGCCGGCAAGTTGCCAGCCAGCACTAGCACACCTCATAAAGCGTTGCTGGGCGGCGAACCCATCGAAGAGGCCGGACTTCAGTGACATAGTGACCACTCTTGAGAAGTACGATGAATGTGTGAAGGAGGGACTTCCCCTAACTCATCATTCAAGACTTGTCAGCAGAAACCTCATTGAACGCTTAAAAGGCTGCGTCTCCATGAGTTCCTCCATACCTGTACATGCTTAA 1152 0.4566 MQFTRASSMAGSCFHGLRMRSSKSKPLPELPPSSSSKKRMKSDLENMERKRFDSLESWSMILDSENVETWEASKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTQDEERRSLLEQQFKSEVALLSRLFQPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRXRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVTTLEKYDECVKEGLPLTHHSRLVSRNLIERLKGCVSMSSSIPVHA* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3468 383 MobiDBLite consensus disorder prediction 18 46 - -
Amo10g3468 383 SUPERFAMILY Protein kinase-like (PK-like) 65 341 IPR011009 -
Amo10g3468 383 Pfam Protein tyrosine and serine/threonine kinase 89 341 IPR001245 GO:0004672|GO:0006468
Amo10g3468 383 PRINTS Tyrosine kinase catalytic domain signature 165 178 IPR001245 GO:0004672|GO:0006468
Amo10g3468 383 PRINTS Tyrosine kinase catalytic domain signature 203 221 IPR001245 GO:0004672|GO:0006468
Amo10g3468 383 PRINTS Tyrosine kinase catalytic domain signature 268 290 IPR001245 GO:0004672|GO:0006468
Amo10g3468 383 PRINTS Tyrosine kinase catalytic domain signature 312 334 IPR001245 GO:0004672|GO:0006468
Amo10g3468 383 PRINTS Tyrosine kinase catalytic domain signature 249 259 IPR001245 GO:0004672|GO:0006468
Amo10g3468 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Amo10g3468 383 SMART serkin_6 87 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3468 383 Gene3D Phosphorylase Kinase; domain 1 76 169 - -
Amo10g3468 383 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 17 372 - -
Amo10g3468 383 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 17 372 - -
Amo10g3468 383 ProSiteProfiles Protein kinase domain profile. 87 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3468 383 CDD STKc_MAP3K-like 94 341 - -
Amo10g3468 383 Gene3D Transferase(Phosphotransferase) domain 1 170 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3468 Amo-Chr10 100465555 100469161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3468 9 383 MAP Kinase Kinase Kinase AT1G62400 81.538 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Amo10g3468 PK_Tyr_Ser-Thr 1.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3468 - - gmx:100799437 685.641