Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3457 ATGGATCTCAAACATCAGACTATTAACACCCACCTTTCTAACCTCTCCTCCCAATCCCACACCACTCGCCTCGCCGCCCTCCGCCATCTCCGCCTTCTCTCCAACCAAGACCCCGCCGCCCGTCCCATCATCTCCGCTGCTGGTGCCATCCCCCACCTCCTTGACGCCCTCTTCTCCTCCTCCCACTCCATCCAGGACAACGCCGCCGCCACTCTCCTCAACATCTCAATCTCCGACCGCCTCCCACTTCTCTCCACGCACCATCTCCTCGACGCCATCGCCCACCTCCTGTCCCGCCACGCCACCTCATCCTCCCCCAACGCCGTCCAGTCCGCCGCAGCCACACTCCACTGCCTCCTCTCCTTCGTCCCCGAATTCCGTCCCACAGTAGGTGCTAGGAGCGACGTCCTCCACTCTCTCATTGGCATAATCGAATCTTCCGATTCACCAAGGAGATCAGTGAAGGACGCGCTCAAGGCGTCATTTGGAATAGCGCTGCATCCGCCGAACCGGGCCATAATGGTCCGACTCGGCGCGGTATCAGCGCTATTCCATCTGGTTGCAAAAGAGAGAATTAAAAAAATTGGAATCATGGAAGATGCGACTGCAGTCATAGCGCAAATTGCGGGGTGCGAGGAGAGCGAAAAAGCGTTTCGTGAGGTTTCGGGGATTCCGTTGTTGTCGAGTTTGTTAGAGTGCGAAGGAAGTAGCTTGAGGACGAAGGAGAATGCGGTTTCGGGTTTGTTGAATTTGGTGAGGTGTAGTGGTGAAGAAACGGTTATGGAAGTTAGAGAGAAAAGCGTTTCTGTTGAGGCCTTGGATGGGATCGTGTACGTGCAGGAGCATGGTAGCGCCAAAGGGAAGAGCAAAGCTGTGGCCTTATTGAAGCTTGTGTTTGATGGTGGAAGCAGTTGTAACAAGAATTGTGGTGATTTGTATCCAGTTGAGCCTGACTCTTAG 960 0.5479 MDLKHQTINTHLSNLSSQSHTTRLAALRHLRLLSNQDPAARPIISAAGAIPHLLDALFSSSHSIQDNAAATLLNISISDRLPLLSTHHLLDAIAHLLSRHATSSSPNAVQSAAATLHCLLSFVPEFRPTVGARSDVLHSLIGIIESSDSPRRSVKDALKASFGIALHPPNRAIMVRLGAVSALFHLVAKERIKKIGIMEDATAVIAQIAGCEESEKAFREVSGIPLLSSLLECEGSSLRTKENAVSGLLNLVRCSGEETVMEVREKSVSVEALDGIVYVQEHGSAKGKSKAVALLKLVFDGGSSCNKNCGDLYPVEPDS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3457 319 Pfam Armadillo/beta-catenin-like repeat 41 76 IPR000225 GO:0005515
Amo10g3457 319 PANTHER U BOX DOMAIN-CONTAINING 2 306 - -
Amo10g3457 319 SUPERFAMILY ARM repeat 12 300 IPR016024 -
Amo10g3457 319 SMART arm_5 167 210 IPR000225 GO:0005515
Amo10g3457 319 SMART arm_5 37 77 IPR000225 GO:0005515
Amo10g3457 319 SMART arm_5 211 253 IPR000225 GO:0005515
Amo10g3457 319 Gene3D - 5 297 IPR011989 -
Amo10g3457 319 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3457 Amo-Chr10 100357730 100359009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3457 15 295 U-box Gene Family AT2G23140 32.270 1.10e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3457 - - gmx:100803111 373.244