Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3443 ATGGGTTTGGCTGCAGAATCACAGTTTCATGTTTTGGCTGTTGATGATAGTCTCATTGACAGAATGTTGATTGAAAGACTTCTCAAAACTTCATCATTTCATGTTACTGCAGTGGACTCAGGAAGTAAGGCTTTAAAATTTCTTGGATTGGTTGAAGAAGAGCAGAGGAATGAAGAGCCTTCCTTTGTTGCTCAAAAAACTCATAATCAGGATGTAGATGTGAACCTGATCATAACAGATTATTGTATGCCAGAAATGACAGGCTATGATCTTCTTAGAAAGATCAAGGAATCAAAATCTCTTAAAGATATACCAGTTGTGATTATGTCCTCAGAGAATGTTCCATCAAGGATCAATAGATGCTTAGAAGAAGGAGCTGAAGAATTCTTTCTGAAACCAGTTCAACAATCTGATGTAAATAAGCTGAGGCCCCATTTATTGAAATCAAAGGTTAAGGAAGTGGGAGAGGAAGACCAACTCATCAACCTCAGTAGAAAGGACATAAATGAAATTTTAGCCTAA 522 0.3697 MGLAAESQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALKFLGLVEEEQRNEEPSFVAQKTHNQDVDVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLRPHLLKSKVKEVGEEDQLINLSRKDINEILA* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3443 173 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 157 - -
Amo10g3443 173 SMART REC_2 9 143 IPR001789 GO:0000160
Amo10g3443 173 ProSiteProfiles Response regulatory domain profile. 10 147 IPR001789 GO:0000160
Amo10g3443 173 CDD REC_typeA_ARR 11 142 - -
Amo10g3443 173 Gene3D - 4 156 - -
Amo10g3443 173 SUPERFAMILY CheY-like 8 142 IPR011006 -
Amo10g3443 173 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 157 IPR045279 GO:0009736
Amo10g3443 173 Pfam Response regulator receiver domain 11 139 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3443 Amo-Chr10 99933284 99934837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3443 1 152 Response Regulator Gene Family AT3G57040 69.737 6.32e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo10g3443 Response_reg 1.7e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3443 K14492 - gmx:100818762 271.937