Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3434 ATGTTGCTATTTCTTGTTCGTTGGTGGATTTGTGTGTTTGTGGTGTTAAATTCAGGAGTTGTTAATGGTCAAAATTACCGAACTGTTAGAGATAGAATCCTTCCATTTAGCAAAATTGTTGTCAATTCTTTGGGACATGGCAACTTCTCTACAATTCAATCTGCCATTGATTCTGTCTCTTCCAACAATAAGTATTGGGTTTTAATCAATGTCGAGGCTGGTATTTATAGGGAGAAAGTGACGATTCCAAGTGATAAACCATATATAATACTGAAGGGAAGTGGAAAGATGAGAACGTGGGTTGAATGGGATGACCATAATACAACTGCTCAGAGCCCCACCTTCCAATCCAATGCTGATAATATCGTTAATACATATAACAATCCAATAAATACAAATCCCAGAGTTCCTGCAGTAGCTGCAATGATAAATGGAGACAAATCTTACTTTTATAGAGTTGGATTCTTCGGATTGCAAGATACTTTGTGGGATAATTATGGAAAACATTATTATAAACTTTGCACTATTCAAGGTGCTGTTGATTTTATCGGCCAGTCATTATTTGAGAGGTGTGGCATAAATGTGATTGGAAGGGCATTAGGAGAAGGATTTGTAGGATATATAACAGCACAAGGGAGAGAAAATCCTAAAGATTCAAATGGATTTGTATTCAAAAATTGTAATGTCTTTGGAGATGGTTCTACTTTTTTGGGAAGACCTTGGAGACCTTATGCCAGAGTTCTTTTCTACAATACAAGTATGGCCAACATTATTCAACCCGCTGGTTGGGATCCATGGGATTCCTCTCAACATGAGGATAACATTATGTTTACAGAGTATGACAATTTTGGACCAGGCTCTGATACGTCCAAACGAGTCAATTGGATTACAAAATTGGATTTAGATACCGTTAATATGATGACAAACACCAGTTTCATAGACTCTGAAGGATGGCTTCAAATTAGCTCTTCATTTTAG 978 0.3681 MLLFLVRWWICVFVVLNSGVVNGQNYRTVRDRILPFSKIVVNSLGHGNFSTIQSAIDSVSSNNKYWVLINVEAGIYREKVTIPSDKPYIILKGSGKMRTWVEWDDHNTTAQSPTFQSNADNIVNTYNNPINTNPRVPAVAAMINGDKSYFYRVGFFGLQDTLWDNYGKHYYKLCTIQGAVDFIGQSLFERCGINVIGRALGEGFVGYITAQGRENPKDSNGFVFKNCNVFGDGSTFLGRPWRPYARVLFYNTSMANIIQPAGWDPWDSSQHEDNIMFTEYDNFGPGSDTSKRVNWITKLDLDTVNMMTNTSFIDSEGWLQISSSF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3434 325 Pfam Pectinesterase 39 315 IPR000070 GO:0030599|GO:0042545
Amo10g3434 325 Gene3D - 36 324 IPR012334 -
Amo10g3434 325 PANTHER PECTINESTERASE 10-RELATED 19 321 - -
Amo10g3434 325 SUPERFAMILY Pectin lyase-like 39 321 IPR011050 -
Amo10g3434 325 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 19 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3434 Amo-Chr10 99882794 99884682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3434 39 272 Carbohydrate Esterase AT2G19150 44.898 2.09e-66 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3434 - - ahf:112786588 613.609