Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3431 ATGCCAGATGTTCAGGCCCTTGTCAATGATTTTGTCAATCAACTTAAAAAACGTAAAATTGAAGGGTCTCAGGCCACAGCAAAGCAGACAGCGGAGGTGCTTCGGTCTGTGATTTCGCAGCAGCGCGTGCCACACACAAACCAGGCTGCAGCTTTGATTAATGCAGTAAGGGCAGTTGGGGAGCAGCTTATTGCTGCAAATCCTGTTGAGCTAGCAGTGGGAAATATTGTGAGGCGTATTTTACACATTATAAGGGAGGAGGATCTTTCCCTTGCAACAGCTGCTATGGCTGGTTTGGGGCTGTCAGTTGCTAGTGATGATGAAGATGACATGGAGCGAAGTGACCAGCCCATTCTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCACCATCCTTGCAAACTCTTCTAGAGGATATGCCTGATTCAGCTGCTGTTCCACACACGTCTTCCTCAGGGGGTGATTCTGAAGGGAAAAGCAGATCGGTTGACAAAGGTTCAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTTAATGAACTTATTCAGGACATATCCACTTGCTATGAACAAATAGCTGAGCAAGCAATAGAGCACATTCATCAAAATGAGGTAATATTGACCCTGGGCAGTTCAAAAACTGTGTTGGAATTTCTTTGTGCTGCAAAGGAAAAAAAGAGATCATTTAAGGTCTTTGTTGCCGAGGGTGCACCAAGATATCAAGGACACCTCCTTGCAAAAGATTTGGCTGCTAGAGGCTTACAAACCACAGTAATTACTGATTCAGCAGTTTTTGCCATGATTTCCCGAGTTAACATGGTTATAGTTGGAGCTCATGCTGTGATGGCTAATGGTGGAGTGATCGCCCCGGTTGGTTTGAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCATTTGTCGTACTTGCTGGGAGTCACAAGCTGTGCCCTTTGTATCCGCACAATCCTGAAGTCCTACTGAATGAGCTGAGATCCCCATCTGAGCTACTTGACTTTGGGGAATTCTCAGATTGCATGGATTCTGCTAGCGGCGCTGGCTCTCTTCACATTGTTAATCCAACATTTGATTATGTGCCACCTAAACTCGTTAGTTTGTTTATTACTGACACTGGAGGGCATAACCCGTCCTATATGTACCGACTCATAGCGGATTACTACTCGGCTGATGATCTGGTGGTGAAAGGAAGGCCTACTACAGGGAGTTGA 1248 0.4615 MPDVQALVNDFVNQLKKRKIEGSQATAKQTAEVLRSVISQQRVPHTNQAAALINAVRAVGEQLIAANPVELAVGNIVRRILHIIREEDLSLATAAMAGLGLSVASDDEDDMERSDQPILSAAAVAAAARSTLRPPSLQTLLEDMPDSAAVPHTSSSGGDSEGKSRSVDKGSRGRKLKHDVIEAVNELIQDISTCYEQIAEQAIEHIHQNEVILTLGSSKTVLEFLCAAKEKKRSFKVFVAEGAPRYQGHLLAKDLAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGAGSLHIVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKGRPTTGS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3431 415 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237
Amo10g3431 415 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 404 IPR037171 -
Amo10g3431 415 MobiDBLite consensus disorder prediction 147 174 - -
Amo10g3431 415 Gene3D - 194 399 IPR042529 -
Amo10g3431 415 PANTHER BNAA01G32370D PROTEIN 8 54 - -
Amo10g3431 415 PANTHER BNAA01G32370D PROTEIN 55 407 - -
Amo10g3431 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 8 54 - -
Amo10g3431 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 55 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3431 Amo-Chr10 99865338 99871069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3431 1 407 Eukaryotic Initiation Factors Gene Family AT3G07300 83.130 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3431 K03754 - gmx:100778545 750.74