Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3403 ATGTGTTTTCCCTCCCTTTCATGTCTCTGTAAAATAGCAATAGTAATGTTGGTGGGAGGTTTAGGAGAAGAAGAAATAGCAAAAGCTCAGTTTCACCAAAGAAATCATGGAGATATCCATAACAAACTCCTTCCTTATTTGACAGTTTCTGTTGACCAATCTGGCCATGCTAACTTCTCTACAATTCAATCTGCAATTGATTCAGTCCCTTCCAACAATAAGCATTGGGTTTTAATCAATGTCAGGGCTGGAGAGGGAAAAAGGAACACTCTTGTTGACTGGGATGACCATGCTACCACCTCACAGAGCCCTACATTCTCAACAATGGCTGACAATGTTGTTGTCAAGTCAATCAGTTTTAGGAATTCATACAATAATCCAAGAAATAGTAATCCAATTGAACCTGCAGTAGCTGTAATGGTAAGTGGAGACAAGTCATATTTCTATGATGTTGGCTTTTTTGGTCTTCAAGACACTTTGTGGGATGATCAAGGAAGACATTACTATAAATTTTGTACTATTGAAGGTGCTGTTGATTTTATTTTTGGTGCTGGTCAGTCTTTATATGAGGGATGTAGCATATCTGTTATTGGAGCGTCCCTAGATCCTGGTTATGTTGGTTTTATCACAGCACAGGGGAGAACAAATTCAAATGATGCAAATGGGTTTGTGTTTAAAAATTGTAAAATATTTGGAAATGGAACCACATTTTTGGGAAGACCATGGAGAGGTTACGCTAGAGTTCTTTTTTATAACACAAGCATGTCTAACGTTATACTACCAACAGGTTGGGATCCATGGAATTTCAATCATCATGAGAATCGCGTAACTTTCGCAGAGTATAAGAATTTTGGACCCGGTTCTAACATTTCATTGCGAGTGAAGTGGAGTAAGAAGCTTAGTTTAGCAACAATTAAATCAATGATTAGCACTAAGTTCATTGACAATGAAGGTTGGCTTAAGGCACAAGACTTCTAA 978 0.3783 MCFPSLSCLCKIAIVMLVGGLGEEEIAKAQFHQRNHGDIHNKLLPYLTVSVDQSGHANFSTIQSAIDSVPSNNKHWVLINVRAGEGKRNTLVDWDDHATTSQSPTFSTMADNVVVKSISFRNSYNNPRNSNPIEPAVAVMVSGDKSYFYDVGFFGLQDTLWDDQGRHYYKFCTIEGAVDFIFGAGQSLYEGCSISVIGASLDPGYVGFITAQGRTNSNDANGFVFKNCKIFGNGTTFLGRPWRGYARVLFYNTSMSNVILPTGWDPWNFNHHENRVTFAEYKNFGPGSNISLRVKWSKKLSLATIKSMISTKFIDNEGWLKAQDF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3403 325 PANTHER PECTINESTERASE 10-RELATED 84 324 - -
Amo10g3403 325 PANTHER PECTINESTERASE 10-RELATED 36 84 - -
Amo10g3403 325 Pfam Pectinesterase 84 314 IPR000070 GO:0030599|GO:0042545
Amo10g3403 325 Gene3D - 46 325 IPR012334 -
Amo10g3403 325 ProSitePatterns Pectinesterase signature 2. 174 183 IPR033131 -
Amo10g3403 325 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 84 324 - -
Amo10g3403 325 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 84 - -
Amo10g3403 325 SUPERFAMILY Pectin lyase-like 47 322 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3403 Amo-Chr10 99637443 99641856 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3403 48 273 Carbohydrate Esterase AT2G19150 41.870 1.46e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3403 - - ahf:112786588 416.001