Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3388 ATGATGGGCACCTTGCTCCAACTCTACCCTTTTCTCTTCCTATTCCTATTCCTTCCAATCCTAAACACAGTTTTATCACAACCCCAACAACTCTTTTATTCTGGATTCAATCATATTCCTGGAACCAACTTATCCCTGACTGGAATAGCGAAAATTGATGACAAAAATGGAATCTTGAAGCTCACAAACGAAACAAGTAGATTAATTGGGCATGCCTTTTACCCAATCCCATTTCAGTTCAAGAATAACAATGGCAGCAGAACCTTCTCATTCTCTTCATCATTTGCAATTGCCATTGTTCCTGAGTATCCAAAGCTTGGTGGCCATGGCTTGGCTTTCACCATTTCAGCTTCCATGGATACTCTCAAGCATGCACTTCCAAGCCAGTATCTTGGCCTACTCAACTCAACCAACATTGGAAACTTCTCCAACCACCTTTTCGCCGTCGAATTCGACACTGTCCAGGACTTCGAATTCGGCGACATAAATGATAACCATGTTGGTATAAACATCAACAACTTGGTTTCCAATGTTTCTTGTAATGCAAGTTACTATGCCGAAGGCGAAGGCGAAGGAAGACTTGAAAATCTAAACCTTAAGGGTGGTAAACCAATCATGGTTTGGGTTGATTATGATTCTGTTAAGAGTGTGATAAGTGTTACACTCTCTCCTTCTTCTACAAAACCAAAGAAACCAACTTTGTCATATTCATTGGATCTCTCACCAATCTTTCATGAGAGAATGTATGTTGGATTCTCTGCTTCAACCGGTTTGCTTGCAAGCTCCCATTATGTCTTGGGTTGGAGCTTCAAGATCAATGGAACTGCTCCAACACTTGATCTCGATTCGCTTCCAAAGCTTCCGGGTCCCAAGAAGAAGCAAACTCCCATGGTTGTTGGGGTTTCAGTTGCTACTTCATTCATTGCTCTGTTTTCTCTGTTTCTTGGATTTTACTTGTTCTGGAAAATCAAGAATGCTGATGTTATAGAGCCATGGGAGCATGAGATTGGGCCTCACAGTTTTTCATGGTTTTTGTTTGTTTTCCTTCACAAAATCCTGAAAATAGAAAACAAAAAATGTTTTAACAACCAAACAGACTCTAAATTTCTTAAAACTATGACTAATTCTTGGAAAAATTGTTGTATTCAATATTTATGTATGTATTTGTGCAACATTATAGATACTCATATAAAGAGCTCAAAACAAGGTCTTAGAGAATTTGTGTCAGAAATCGCCAGCATCGGCCGGCTTCGCCACCGGAACTTGGTCCAATTGCTTGGCTGGTGCCGCCGCCGTGGCGACCTCCTACTTGTGTATGATTTCATGGAAAATGGTAGCCTAGACAAGTACTTATTCGACGAGCCGAAAACGATCCTAAGATGGCAACAAAGGTTCAAGATCATAAAGGATGTTGCTTCAGCACTTTTATATCTCCATGAAGGATATGAACAAGTGGTGATTCATAGAGATGTTAAAGCTAGTAATGTTCTTTTAGATAGTGAAATGAATGGAAGGCTTGGAGATTTTGGTTTAGCAAGATTGTATGAACATGGTGGTCATCCTAGCACAACAAGGGTGGTTGGAACATTAGGTTATTTGGCACCTGAGTTGCCAAGAACAGGAAAAGCCACTCCTAGCACTGATGTTTATGCATTTGGTGCATTAATGCTTGAAGTGGCATGTGGGGTTAGGCCTGTTGATCCAAGAAAGGCACAACATGAGGATCTGGTTTTGGTGGATTGGGTTTGGAAGATGTACAAAGAAGGGAAGTTAATTGATGTTGTGGACCCAAATTTGAATGGTGATTTTGATGAGAGGGAGGTTGTTATGGTTCTCAAATTAGGCCTAATGTGTTCAAATGGTGCACCAACTTCTAGGCCTAGCATGAGGCAAGTGACTAGGTATTTGGATGGTGAAAATTTGTTGCCTGATTCATTGATGAAGCCTCATCATAATAACCAAGAGGGTTTTGATGAGTTCTTGAATCCATTTGGGTCTTCTTTTAGTAGTTCAGATAATATTGGCATGTATGCTAGTTTTCCTTCATTCACTAATTCCCCTGTTTTTACTCCTATTGGTAGGAGAGAAACAAGCTGA 2097 0.4034 MMGTLLQLYPFLFLFLFLPILNTVLSQPQQLFYSGFNHIPGTNLSLTGIAKIDDKNGILKLTNETSRLIGHAFYPIPFQFKNNNGSRTFSFSSSFAIAIVPEYPKLGGHGLAFTISASMDTLKHALPSQYLGLLNSTNIGNFSNHLFAVEFDTVQDFEFGDINDNHVGININNLVSNVSCNASYYAEGEGEGRLENLNLKGGKPIMVWVDYDSVKSVISVTLSPSSTKPKKPTLSYSLDLSPIFHERMYVGFSASTGLLASSHYVLGWSFKINGTAPTLDLDSLPKLPGPKKKQTPMVVGVSVATSFIALFSLFLGFYLFWKIKNADVIEPWEHEIGPHSFSWFLFVFLHKILKIENKKCFNNQTDSKFLKTMTNSWKNCCIQYLCMYLCNIIDTHIKSSKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMENGSLDKYLFDEPKTILRWQQRFKIIKDVASALLYLHEGYEQVVIHRDVKASNVLLDSEMNGRLGDFGLARLYEHGGHPSTTRVVGTLGYLAPELPRTGKATPSTDVYAFGALMLEVACGVRPVDPRKAQHEDLVLVDWVWKMYKEGKLIDVVDPNLNGDFDEREVVMVLKLGLMCSNGAPTSRPSMRQVTRYLDGENLLPDSLMKPHHNNQEGFDEFLNPFGSSFSSSDNIGMYASFPSFTNSPVFTPIGRRETS* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3388 698 CDD lectin_legume_LecRK_Arcelin_ConA 33 274 IPR001220 GO:0030246
Amo10g3388 698 Gene3D - 30 280 - -
Amo10g3388 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Amo10g3388 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 292 IPR013320 -
Amo10g3388 698 Gene3D Transferase(Phosphotransferase) domain 1 443 648 - -
Amo10g3388 698 SMART serkin_6 346 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3388 698 ProSiteProfiles Protein kinase domain profile. 350 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3388 698 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 13 660 - -
Amo10g3388 698 SUPERFAMILY Protein kinase-like (PK-like) 397 653 IPR011009 -
Amo10g3388 698 Pfam Legume lectin domain 32 284 IPR001220 GO:0030246
Amo10g3388 698 PANTHER - 13 660 - -
Amo10g3388 698 Pfam Protein kinase domain 396 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g3388 698 Gene3D Phosphorylase Kinase; domain 1 392 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3388 Amo-Chr10 99555057 99557292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3388 24 697 Receptor kinase-like Gene Family AT3G55550 51.585 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo10g3388 Lectin_legB 2.6e-73 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3388 - - aip:107621816 1234.94