Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3386 ATGGCATTGAAGCTGCTACACGGGACTTTGACGGCAAACATTTCTCAGTTCCGAAATATCACGCCGCTTGTTCGCCGTATCGTGTCTCAGGAACGGGAGGCTGCCAGATTTGGTAACAGTGAACCTCGTAAACTCTATGCATCCATTTATCTGGATGAAGTAAAAATGAAAAGCAGGCATATACCAATAGAAGACTTCAAGAACATTGATAAATGGAATATGAAATTTAGCTTTCCTTGTGCGCATAATGCATCAAATGTCATTTTCAGCATTCATTGTGGCAAGGCCCCCAATGGTCGGCGAAATTCAATGTTAGAAGCAAAAGTGCCATGTGGGGAAATCATCAACAATAATGGTCAATATCAATCAGAAGTCCCTTTGATTGATCCTAATTCAGACACGAATGATGCAGAAATGCATGAGTCACTTCACATGAAGCTGAATTTTGATGAAGCTTTTAATAATTCGAAAATAGGCATCGAAAGGGCTTTCTTTCAAGAAGTTTCTGACAGTTACTATCCACTGAGAAATGGATGCAAAGTTACTCTTTATCAGGATGCTCATGTCCCAGATGATTATGTCAAGAAAATGGTCAATGCCGGACTGGTGAATTATGAGCCTCAGAGATGTTGGGAGGATATATTTGATGCAATCAATAAAGCAGAGCACTTCATATACATTGCTGGCTGGTCTTTTTACACTGACATAACATTGAGAAGGGATCCAAAGAGGCCAAAGGATGGGGGAGAACCAAAACTTGGAGAGCTGCTCAAGAGAAAGGCAAACGCTGGTGTCAAGGTCGTATTGCTTCTTTGGGAAAATAAAGCAAGAAGCCGGTGGAGGATTCTGTCACCAATACTTGACTTCTTTGGAGCCGTCAATACTCACGACAAAGAAACACAAGATTATTTTAAAAATACTGGTGTGCATTGTATTTTAAGTACTAGGAGCTTTACCTACACTCATCACCAGAAAATGGTGGTGTTGGACAAGGAGTTACCTAGTGGTGAGTCAAAGAAGAGGGGAATAACGAGTTTTCTTGGGGGTATTGATCTCTGTGATGGTAGATATGATACTCCATCTCATCCACTTTTTAGCACCTTGAATGAGCATAAAGAACATGGTATAGACTTTTATCAACCCAGCATTAAAGGCTCCAGAATTCAAAATGGTGGTCCAAGGCAACCCTGGCATGATGTGCACTGTCAGCTTGAAGGACCTGTTGCATTGGATGTTTACAAGACTTTTGTGCAAAGATGCGAGAAGGAAGGTAAACAGGATATACTTGTTCCAGAGTCTGCTATTAAAAGCCTCATCGATCAGACATCTTCAATAACAAACCATAGTGATGATCGTGAGACTTGGAATGTTCAGTTACTTCGATCTGTTGACAGCAGAGCTATTTCTGGGTTGTCAGAAACTGCTTACGGAAATGGGGATATCATAATAGACCGTAGCATTCAACATGCTTACATTGAAGCTATTCGGCGCTCAAAGAATTTCATCTACATTGAACATCAATATTTCATAGGAAGCTGTTTTGACTGGCGTGCAGGTAAGTTCAACCCTAAGCAACTTGGTTGTTTGCATCTAATTCCAAAGGAGCTATCACTTAAAATTGTTAGCAAGATTGAAGCTGGAGAAAGGTTCACTGTTTATGTTGTGCTTCCTATGTGGCCGGAGGGAAATCCACGTAGTCGTGTAGTTCAGCTGATGTTGGATTGCCAAAAGAGGACCATAGAAATGATGTACAATGATATTATTGGTGCACTCAAGAAAAAGAATCCTGCAGAAAGATTTGAAGAAATTAGAAAACATGCTCAGAGTTATTTGGCATTCTTCTGGCTTGGCAACCGGGAGGCAAAAACAGATGCTGAGCTTCAACCAATATCAAGTCCATACAGAAATTTTCATTACATGAATGCTCAAACTTCCAGGCGATTTATGATTTACGTGCACTCCAAGATGATGATAGTGGATGATGAATACATTATCAATGGATCTGCAAACATTAACCAGAGGTCAATGGACGGTGCTAGAGATACCGAGATCGCCATCGGAGCTTATCAACCCTTATATTTGGCTGCCAATCAAGATGGTGCACGGGGCCAGATTCATCATTTTCGCTTGTCATTGTGGTTCGAACATCTTGGCAGATATGAAGCCACTTTCCTCAACCCTGAAAGTGAAGATTGTATTAGCAGGGTGAATCAGCTTGCTCAAGACAATTGGAACGAGTATAAAGGAGAAACATTAGGCGCTGACCTTTCTGGCCACCTTCTGCGCTATCCCATTGATATTTCTCCTGATGGAAGTATCACACATGACACTGATGAAACATCTACATTCCCGGACACCGATGCCAGTATTCTAGGTAACCAAGCCTTAGATGATTTGCCTGACAACGATACGCTCCTAAAATTAGTGGAGAGGGTCTAG 2439 0.4137 MALKLLHGTLTANISQFRNITPLVRRIVSQEREAARFGNSEPRKLYASIYLDEVKMKSRHIPIEDFKNIDKWNMKFSFPCAHNASNVIFSIHCGKAPNGRRNSMLEAKVPCGEIINNNGQYQSEVPLIDPNSDTNDAEMHESLHMKLNFDEAFNNSKIGIERAFFQEVSDSYYPLRNGCKVTLYQDAHVPDDYVKKMVNAGLVNYEPQRCWEDIFDAINKAEHFIYIAGWSFYTDITLRRDPKRPKDGGEPKLGELLKRKANAGVKVVLLLWENKARSRWRILSPILDFFGAVNTHDKETQDYFKNTGVHCILSTRSFTYTHHQKMVVLDKELPSGESKKRGITSFLGGIDLCDGRYDTPSHPLFSTLNEHKEHGIDFYQPSIKGSRIQNGGPRQPWHDVHCQLEGPVALDVYKTFVQRCEKEGKQDILVPESAIKSLIDQTSSITNHSDDRETWNVQLLRSVDSRAISGLSETAYGNGDIIIDRSIQHAYIEAIRRSKNFIYIEHQYFIGSCFDWRAGKFNPKQLGCLHLIPKELSLKIVSKIEAGERFTVYVVLPMWPEGNPRSRVVQLMLDCQKRTIEMMYNDIIGALKKKNPAERFEEIRKHAQSYLAFFWLGNREAKTDAELQPISSPYRNFHYMNAQTSRRFMIYVHSKMMIVDDEYIINGSANINQRSMDGARDTEIAIGAYQPLYLAANQDGARGQIHHFRLSLWFEHLGRYEATFLNPESEDCISRVNQLAQDNWNEYKGETLGADLSGHLLRYPIDISPDGSITHDTDETSTFPDTDASILGNQALDDLPDNDTLLKLVERV* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3386 812 Gene3D Endonuclease Chain A 482 696 - -
Amo10g3386 812 SUPERFAMILY Phospholipase D/nuclease 160 429 - -
Amo10g3386 812 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 648 675 IPR001736 GO:0003824
Amo10g3386 812 Pfam Phospholipase D Active site motif 320 356 IPR001736 GO:0003824
Amo10g3386 812 SUPERFAMILY Phospholipase D/nuclease 440 732 - -
Amo10g3386 812 SMART pld_4 648 675 IPR001736 GO:0003824
Amo10g3386 812 SMART pld_4 318 356 IPR001736 GO:0003824
Amo10g3386 812 PANTHER PHOSPHOLIPASE D 4 796 IPR015679 -
Amo10g3386 812 PANTHER PHOSPHOLIPASE D ALPHA 3 4 796 - -
Amo10g3386 812 Pfam PLD-like domain 644 686 IPR025202 -
Amo10g3386 812 Pfam Phospholipase D C terminal 722 793 IPR024632 -
Amo10g3386 812 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 318 356 IPR001736 GO:0003824
Amo10g3386 812 Gene3D Endonuclease Chain A 193 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3386 Amo-Chr10 99527101 99531519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3386 1 800 Phospholipase D Gene Family (Wang group) AT3G15730 48.445 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3386 K01115 - sind:105158388 744.962