Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3345 ATGTCAGAATCAAACGCACTAGCAAATGGCTTGGCCGGTGCTGGTGGCGGTATCATTGCTCAAATCATAACTTATCCTCTTCAAACGGTAAACACGCGTCAGCAAACTGAGAGAACACTGAAGAGGAACAAGCAGAGTTTGCTTCTTCAGTCCTCCAATACAACCACTACTTCTGCTCCTGGCACTCTTCTTCAGATCCTTCATGTAATTGGAAGTGAGGGTTGGGGTGGACTCTACAGTGGCCTTAAGCCTTCTCTGCTTGGAACTGCTGCTTCACAGGGAATATACTATTATTTCTATCAGATTTTCAAGAACAAGGCAGTGGCTATTGCAGCTGCTAGAAAACTTAAAGGCCATGGAGATGGTACTGTTGGAATGTTTGGTTGGCTTGTTGTTGCTGCTATTGCTGGGTCCTTGAATGTGCTGCTAACAAACCCAATATGGGTTCTTGTGACTCGTATGCAGACACATACTCAAGCAGAAAGAAAAATCATGGAGGAAAAGAAAGAGGCCTTGAGGATGGCAGCTTCTGAAAGCAGCTTAGCAGGCTCAATATTACGAGAGAAATTGGCTGAACTTGATTCTAAGAAACCACGGCCATATGGAACTATACATGCAGCTAATGAAGTGTATAGCGAAGCTGGTATTGTTGGATTTTGGAAGGGTGTCATCCCTGCACTTATTATGGTCTGCAATCCATCAATACAGTTTATGATTTATGAGAGCTCATTAAAGCGTCTAAGGGCGCGATCGTCTAAGAAGCAGGGTAATGTAACTGCATTGGAGGTCTTTCTCCTTGGAGCATTAGCAAAACTTGGAGCAACCGTTTCAACATATCCCTTACTGGTTGTCAAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGCTAGTAACTCATTAAGATACTCAGGTACCTTTGATGCAATACTGAAAATGATCCGTTATGAAGGATTGCCTGGTTTTTATAAAGGGATGAGCACAAAGATAGTACAGAGTGTTTTTGCAGCTTCTGTTCTATTCATGATTAAGGAGGAGCTTGTTAAGGTTTTCATTTCATTGGCAGATAAGAGCAAAAAAGTTGTATCAAATTTAAGGAATTAA 1101 0.4205 MSESNALANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKRNKQSLLLQSSNTTTTSAPGTLLQILHVIGSEGWGGLYSGLKPSLLGTAASQGIYYYFYQIFKNKAVAIAAARKLKGHGDGTVGMFGWLVVAAIAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEEKKEALRMAASESSLAGSILREKLAELDSKKPRPYGTIHAANEVYSEAGIVGFWKGVIPALIMVCNPSIQFMIYESSLKRLRARSSKKQGNVTALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGASNSLRYSGTFDAILKMIRYEGLPGFYKGMSTKIVQSVFAASVLFMIKEELVKVFISLADKSKKVVSNLRN* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3345 366 Gene3D Mitochondrial carrier domain 47 362 IPR023395 -
Amo10g3345 366 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 4 357 - -
Amo10g3345 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 106 IPR018108 -
Amo10g3345 366 Pfam Mitochondrial carrier protein 124 247 IPR018108 -
Amo10g3345 366 Pfam Mitochondrial carrier protein 258 350 IPR018108 -
Amo10g3345 366 Pfam Mitochondrial carrier protein 4 105 IPR018108 -
Amo10g3345 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 258 349 IPR018108 -
Amo10g3345 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 246 IPR018108 -
Amo10g3345 366 SUPERFAMILY Mitochondrial carrier 5 345 IPR023395 -
Amo10g3345 366 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 357 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3345 Amo-Chr10 99114973 99117791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3345 209 364 Chloroplast and Mitochondria Gene Families AT2G47490 26.582 7.71e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3345 K13354 - gmx:100775304 586.645