Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3297 ATGGATTCTCAAATCTTTAACTTCCTTGCTTTCATCTTCTTTCTCTTCTTCATCATTGCTGCTCTGAGAATAAGAAAGAAAAGTGATGTAATTCCAAATATACCCCCAGGACCATGGAAGCTACCTATCATAGGAAACATACCAAATCTTGTTACATCAACTCCACATAGAAAGCTAAGAGATTTGGCCAACAAATATGGACCATTGATGCACCTTCAACTTGGACAAGTCTCTACCATTGTTGTTTCCTCAGCAGAGTATGCTAAAGAGGTTATGAACACACATGACATCATCTTTGCTTCAAGGCCTGCAGTTCTAGCAGCAAAGATAATTTCTTATGATTGCACAAACATTGGTTTTGCACCCTATGGAAATTATTGGAGGCAGTTAAGGAAGATTTGCACCTTGGAGCTCTTGAGCACGAAACGAGTCAATTCGTTCCGGCCAATAAGAGAAGAGGAGTTCACCAATCTTGTTAAGAGGATTATGTCCTCAAAGGAAGGATCAGTTAATCTTACTGAAGAAGTGCTTTCATCCATATATGGAATCGTTTCGCAGTCTGCGTTTGGAGGCACAAAATGTGGGGATCAAGAGAAGTTCATATGCCTTGTGCAACAAGCAACAGCTGTTGCAGGTGGTTTTGATGTAGGAGATCTGTTTCCTTCTTGGGAATGGCTTCAACTTGTGAGTGGATTGAGGCCTAAGCTTGAGAGTTTCCAAAGACAAATTGATGAGATATTGGAAAACATTGTTAGTGATCACAAAGAGGCAAAGTTGGAAGGTAAAAAGAGCAAAAGTGATGAATCACATGAAGATCTTGTAGATGTTCTCCTTCAATTTGAAGATGCTACAAATCAAGATATTTGCTTAAGTAGAAACAATATCAAGGCTATACTCTTGGATATCTTTGGTGGAGGAAGCGAGACATCGGCGCATACTATAGATTGGGCAATGTCAGAGATGATAAGGGATCCAAGAGTGATGGAGAAAGCACAAGCTGAGGTCAGAGAGTTATTCAACAGAATAGGAAAGGTTGATGAGACTCTGATCAATGAACTCAAGTACTTGAAATCAGTTGTGAAAGAGACACTAAGGTTACACCCTCCAGCTCCTCTTTTACTTCCAAGAGAATGTGGAGAAGCCTGTGAGATCAATGGATATCACATTCCATACAAAACTAAGGTCATAGTGAATGCTTGGGCAATTGGAAGAGATCCAAACTATTGGAGTGACCCAGAGAAGTTTTATCCAGAGAGGTTCATTGATAGTTCCATAGACTACAAAGGGAATAATTTCGAGTTCATTCCGTTTGGTGCTGGAAGAAGAACATGTCCGGGCAGCACATTAGGCTTGTTAAATGTTGAGCTGGGGCTGGCATATTTGTTGTATCACTTTGATTGGAAGCTTCCAAGTGGAATTAAAGGTCAGGATCTGGATATGTCTGAGGTATTTGGAGTTACTGTTAGAAGAAAAAAAGACCTGCAATTGGTTCCCATTGTTTTTAGTCCTTTGCTTGAAACACAAACATAG 1530 0.4007 MDSQIFNFLAFIFFLFFIIAALRIRKKSDVIPNIPPGPWKLPIIGNIPNLVTSTPHRKLRDLANKYGPLMHLQLGQVSTIVVSSAEYAKEVMNTHDIIFASRPAVLAAKIISYDCTNIGFAPYGNYWRQLRKICTLELLSTKRVNSFRPIREEEFTNLVKRIMSSKEGSVNLTEEVLSSIYGIVSQSAFGGTKCGDQEKFICLVQQATAVAGGFDVGDLFPSWEWLQLVSGLRPKLESFQRQIDEILENIVSDHKEAKLEGKKSKSDESHEDLVDVLLQFEDATNQDICLSRNNIKAILLDIFGGGSETSAHTIDWAMSEMIRDPRVMEKAQAEVRELFNRIGKVDETLINELKYLKSVVKETLRLHPPAPLLLPRECGEACEINGYHIPYKTKVIVNAWAIGRDPNYWSDPEKFYPERFIDSSIDYKGNNFEFIPFGAGRRTCPGSTLGLLNVELGLAYLLYHFDWKLPSGIKGQDLDMSEVFGVTVRRKKDLQLVPIVFSPLLETQT* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3297 509 Pfam Cytochrome P450 35 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 Gene3D Cytochrome P450 30 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 PANTHER CYTOCHROME P450 71B11-RELATED 9 503 - -
Amo10g3297 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Amo10g3297 509 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 503 - -
Amo10g3297 509 SUPERFAMILY Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 Coils Coil 328 348 - -
Amo10g3297 509 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3297 509 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3297 Amo-Chr10 98604180 98606013 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3297 8 498 Cytochrome P450 AT3G26310 43.114 7.45e-141 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3297 - - gmx:102665189 699.123