Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3282 ATGCGCCATCGCAACGTTCCYCAATCCATGGACCTCGAGATGGAAGCCACAGGATTCGAATCCGAAGAAGAAGAAGAGGAAGAAGACGATGAAGACGACGAAGAAGAACAACATCCACAAACCAATAACAATGACAATAACAACTACAACAACCCTTCTTCCTCCAACTCAAACCCTAACAGCACCACTGAGCCCTACATCGGCATGGAGTTCGACTCCGAGCTATCCGCACGCGCCTTCTACAACGCCTACGCGCGTCGCATCGGCTTCAGCACGCGCGTCAGCGTTTGTCTCCGCTCCCGAAAGGACTCCTCCGTCATCCGCCGCCGTGTTGTATGCTCCCGAGAGGGCTTCCGYCGCAACCCTGAGAACCACGACCCTAAGCGCCAYCGCTCCGTGACACGTGTCGGCTGCAAAGCTCAGATCACCGTCAAGAAGAAGGGCCCACTCGGCAAGTGGTACATCTCCAAGTTCATCAAAGACCACAACCACGACCTCGTCCCTCCSGATAGGGTCCACTGCCTCCGCTCSCACCGCCGCGTCAACGGTGCCGCCCGCAGCCTCATCGATACTCTTCACGCAGCTGGCATGGGCGCTGCCGAGGTCATGACGGTRCTCATCAAGGAGTCTGGCGGCATCGACAACGTCGGCTTCACAAAAGTTGACTGCCAGAACTACATGACGTCATCTTCTAAGAGGAGCCTCGGGAGTGGGAACCAGCTTACACTGATTAAGCAGTATGAGAAAGGAGTCGCGGATCGATATGAGAAGGAAGTGAAGGAGGATTATGATACGCTGAATACCGCACCGGTTTTGAGAACTCCTTCTCCAATGGAAAAACAAGCGGCTGGTCTCTACACGAGGAAAATATTTGCAAGGTTCCAAGAGGAATTGGTTGAGACCCTTGCATATGCTGCTACGTTGATGGATGATGCAAGATCACAAGCTACTTATCGGGTGGCGAAGTACGGGGAGGAGAATAGGGCGCATTTTGTTAGGTTCAATGTCTTCAGGAAGAAAGCTAGCTGCAGCTGCCAAATGTTTGAGTTTGCGGGTCTTGTCTGTAGGCACATATTAGCAGTTTTTAGGGTCATCAATATTCTTACGCTTCCGTCCCATTACATCTTGAAAAGGTGGACAAGAAACGCAAAGAGTATCTTGTTGGATAAAGGAGCACGGGAATTGCAAAATAATCTGGAAGAGTGTTACTCCTCTCGCTACGATAGTTTGAGCCGGGAAATTATGAGTTATGTAGAAATGGGGGCAGAATCATCGGATACTTATAGCGTTGCRCTGAATGGTCTACGYGAGGCTGCGAAAAAGGTTGCGGATGCAAAGAAACCTCGTCCAGCACCCGTGCAAAGTACTTCAGATAATAATGAAAACCATGAGAGTAGTCAATCTAGTGATACAGATCAGGATAAGAAAATTCAAGAGTTGACTACTGAGTTAGAGGGTGCTCGGCAGCGATGTGAATCGTATAGGCAAAACCTGTTTGGCTTACTAAAAAATATGGAGGAGCAGAAGTTAAAAATATCTGTTAAGGCTCAGAGTGTTAGGCTAAATCTAGGAAGTGAATTGGTAGCTGAAGAAAGTAAGTAG 1602 0.4906 MRHRNVPQSMDLEMEATGFESEEEEEEEDDEDDEEEQHPQTNNNDNNNYNNPSSSNSNPNSTTEPYIGMEFDSELSARAFYNAYARRIGFSTRVSVCLRSRKDSSVIRRRVVCSREGFRRNPENHDPKRHRSVTRVGCKAQITVKKKGPLGKWYISKFIKDHNHDLVPPDRVHCLRSHRRVNGAARSLIDTLHAAGMGAAEVMTVLIKESGGIDNVGFTKVDCQNYMTSSSKRSLGSGNQLTLIKQYEKGVADRYEKEVKEDYDTLNTAPVLRTPSPMEKQAAGLYTRKIFARFQEELVETLAYAATLMDDARSQATYRVAKYGEENRAHFVRFNVFRKKASCSCQMFEFAGLVCRHILAVFRVINILTLPSHYILKRWTRNAKSILLDKGARELQNNLEECYSSRYDSLSREIMSYVEMGAESSDTYSVALNGLREAAKKVADAKKPRPAPVQSTSDNNENHESSQSSDTDQDKKIQELTTELEGARQRCESYRQNLFGLLKNMEEQKLKISVKAQSVRLNLGSELVAEESK* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3282 533 MobiDBLite consensus disorder prediction 441 476 - -
Amo10g3282 533 Pfam FAR1 DNA-binding domain 80 168 IPR004330 -
Amo10g3282 533 Coils Coil 477 497 - -
Amo10g3282 533 Pfam SWIM zinc finger 340 365 IPR007527 GO:0008270
Amo10g3282 533 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 54 229 IPR031052 GO:0006355
Amo10g3282 533 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 241 462 - -
Amo10g3282 533 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 54 229 - -
Amo10g3282 533 MobiDBLite consensus disorder prediction 16 38 - -
Amo10g3282 533 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 241 462 IPR031052 GO:0006355
Amo10g3282 533 MobiDBLite consensus disorder prediction 41 66 - -
Amo10g3282 533 ProSiteProfiles Zinc finger SWIM-type profile. 334 366 IPR007527 GO:0008270
Amo10g3282 533 SMART 26again6 341 368 IPR006564 GO:0008270
Amo10g3282 533 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3282 Amo-Chr10 98448343 98451504 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g3282 FAR1 1.4e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3282 - - qsu:112029984 365.155