Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3280 ATGGGAACAGAAGAATCCGATAAACTTGGTGCATCTTTGAAATTTATGGAGCCTAAAGATGAAACTGTAAACAGGTCTTTGCAGCCACATTGGACTAGTTCTATGCAGGCATATCATAATGCTGGTTCTACTCCAATTCCCTTCTTAAACCCGCATTATGGTCCTTACTTTGGCCAATTCATTTGGCCGAAACAGTCAACCATCACTCAATATAATTTTTTGCACGAGTCCATGAGGATTTCTAATAATTCTGCTATAGCTGGAGTGATTCCAAATCAGCAGCAACAACCAAGTGCTGTCCCAGTAGTTGGGCCTGCTGGGGATGCTGCATCAGTTTTTTCTGAAAAAATACAAAGGATGTTTGGTGCAAATAACGAGGATTCAATTAAAAAATGTAATGGAAGCTTACAATCTAAAAGCTCAATCACTAAGGAAGCAAAAGAAATTAAGATCAKYTGCTCAACTCCAAACCATGACATGAGTGGAGCAAGTGGAGGCAAAGAACCTTCAGATGAAGGCCATGACAGTAAACATGATTTCCCTTCACCAAAGCAGAAATGCAATGTGGTGTCTGAAAATGTAAATTCAAGAAAACAACACAAGGATACAATGGCTGGTCTGAATGCTTCTGCCAGTGTTGCTAAACTTGCAAAACTGGAAAATGATGAAATMAGGAAAGAAAGAAAAAGATTATCTAATCGCGAATCAGCCAAGAGATCAAGGTTAAGAAAACAGAAAGAATGCGAAGAGCTACGTGGAAACATGGACAATTTAAAGGATGAAAATTCCTCACTCACACACATGCTTATAAGGCTTTCAGAGGAATGTATGGATCTCAGCAATGAAAACGATTCTATCCAGGCTGAACTGGTTAAGATGTATGGAGCAGAATCAATAGCAGATCTATTGCCCATGAAGCCTTCTTGA 927 0.3916 MGTEESDKLGASLKFMEPKDETVNRSLQPHWTSSMQAYHNAGSTPIPFLNPHYGPYFGQFIWPKQSTITQYNFLHESMRISNNSAIAGVIPNQQQQPSAVPVVGPAGDAASVFSEKIQRMFGANNEDSIKKCNGSLQSKSSITKEAKEIKIXCSTPNHDMSGASGGKEPSDEGHDSKHDFPSPKQKCNVVSENVNSRKQHKDTMAGLNASASVAKLAKLENDEIRKERKRLSNRESAKRSRLRKQKECEELRGNMDNLKDENSSLTHMLIRLSEECMDLSNENDSIQAELVKMYGAESIADLLPMKPS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3280 308 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 307 IPR044827 GO:0003700|GO:0006355|GO:0043565
Amo10g3280 308 CDD bZIP_plant_GBF1 226 277 IPR045314 GO:0003700|GO:0006355
Amo10g3280 308 SMART brlzneu 221 285 IPR004827 GO:0003700|GO:0006355
Amo10g3280 308 MobiDBLite consensus disorder prediction 152 190 - -
Amo10g3280 308 Pfam bZIP transcription factor 223 283 IPR004827 GO:0003700|GO:0006355
Amo10g3280 308 PANTHER BZIP TRANSCRIPTION FACTOR 1 307 - -
Amo10g3280 308 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 228 243 IPR004827 GO:0003700|GO:0006355
Amo10g3280 308 SUPERFAMILY Leucine zipper domain 224 280 IPR046347 GO:0003700|GO:0006355
Amo10g3280 308 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 223 286 IPR004827 GO:0003700|GO:0006355
Amo10g3280 308 MobiDBLite consensus disorder prediction 168 182 - -
Amo10g3280 308 Gene3D - 223 281 - -
Amo10g3280 308 Coils Coil 214 289 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3280 1 302 bZIP Transcription Factor Family AT4G36730 29.730 4.54e-22 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo10g3280 bZIP_1 3.1e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3280 K09060 - gmx:102665715 253.062