Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3273 ATGATTTTTAATACGAGCTTTAGTGGAGCTGGAATCTCGATTGTTTTGGTTTACCGAGGATTCTCCGTTAGCCTGATTCATACTCGTTTATTGTTTCGAAAGCCGAGAGGCAGAACCGTTGACGACGAGCAGCACTTTAGGCAGCGAAACCAAGCGCGAAGGAGGCATGGAAGTACGGAGGCACGTAGGCGCGACACAGCGAAGGACAGAGGCGCGACGAGCAGAATACGAGCAGTGGAACACACTAGGCACAAAAGAACGAGCAGAATACAAGGGATGAGGCACGAGAAGAACGCTGAGAGGAGGAGGCTTGGCGAGACAGGACTGTGCGGTAGATCCGGAGAGAGCTCGGTGAAGAAGTTAGGGTTAGGGATGTACGAGTGTGGGGATAGTGTGAAGGCTAAGCAACGAGAAAGGGCTCATTTCCAAAGTGACATCAAGAGAAACAATTTCTGGCTTTTTCTTCCCTACTCCATCTACCCTTTCAGGAAGATGGCTAAAAGATATCAGGGATGTGCAGTGGGAATCGACCTCGGTACAACTTATTCATGTGTTGCTGTGTGGCAGGAAGAGCACCAAAGAGCTGAGATCATCCACAATGACCAAGGCAATCGAACAACACCTTCATGTGTTGCTTTCACTGATAAGCAGAGGTTGATTGGTGATGCTGCTAAGAACCAAGCTGCTTCCAATCCAACTAACACTATCTTTGATGCTAAAAGGTTGATTGGTAGAAAATATAGTGACTCCATTATCAAGAATGACATGATGCTCTGGCCATTTAAAGTCATTCCTGGTGTTGATGACAAACCAATGATTGTTGTTACATATAAGGGCCAGGAGAAGCGTCTTTGTGCAGAAGAAATTTCATCTATGGTTCTAACAAAAATGCGTGACATTGCAGAGGCCTATTTGGAAAGTCCAGTCAATAATGCAGTAATTACTGTGCCTGCTTATTTCAGTGACTCTCAACGTAAAGCCACAAAAGATGCAGGTGCCATTGCAGGCCTCAATGTCATGAGAATTATCAATGARCCTACGGCTGCAGCAWTTGCATATGGCCTGGACAAGCTAGCTGATTGTAAAGAAGAACGAAATATTTTCATCTTTGACCTCGGTGGTGGTACTTTTGATGTGTCTCTGCTTACCATTAAAGATAAGGTCTTTGAAGTTAAGGCTACTGCAGGAAATACTCACCTTGGCGGAGAAGACTTTGATAACAGGATGGTGAATTACTTCGTAGAAGAGTTCAAAAGGAAGAACAATGTGGATATTAGTGGGAATTCAAAAGCCTTGAGAAGGTTGAGAAGTGCATGCGAAAGGGCAAAAAGGACACTCTCATTTGCTTTTGATACTGTTATTGAAATTGATGCTTTATATCAAGGCATTGACCTTTATTCATCACTCAGCCGTGCCAAGTTTGAGGAACTAAACATGGAACTCTTTAGAAATTGTATGGAAACAGTAGATAAGTGTCTCAYTGATGCTAAGATAGACAGGTCTTGTATACATGATGYTGTTCTTGTTGGCGGCTCWTCTAGGATTCCCAAAGTGCAGCAGCTATTGCAGGAATTCTTCAGAGGTAAGGATCTTTGCAAGAGTATCAACCCAGATGAAGCTGTTGCTTATGGGGCAGCAGTTCAGGCTGCTTTATTGASTGAAGACATCAAGAAAGCTCCAGAACTGGTTCTACTGGATGTTACACCCTTATCACTTGGTATTGGGACAACACCTGGGGACCTCATGGATGTAGTGATTCCTAGGAATACTACCATACCTAAAAAGATGACAAAAAGATACACCACACCTGAAGATAACATGACCAGTGTTTGTATTAATGTTTATGAGGGTGAGAGGACAAGAGCCACAGATAACAACTTGCTTGGTTGGTTTAAACTTTCTGGTCTTCCTCATGCTCCTCGTGGCCATCCTCTATATGTATGCTTTGATATAGATGCTGATGGTATCCTAAATGTATCTGCCTGGGAAGAAACTAATTGTTGTAGGAATGAAATTACTATAACCAATGACAATGAAAGACTATCAGCTAAGGAAATTCAAAGACTAATTGAGGAAGCTGAGAATTACAAGGTTGAAGATGCAAATTTCCTTGAGAAGGCTAATGCATTGAGTGATTTGGATCGTTATGTTTACAAGATGGAAAAAGCTCTAAAGGATAAAGATATCTGCTCTAAGCTTTGCCCTCTGGACAAGGAGAAGATAGAGTCTGCAATTGCTAAGGCCAGAAATCTGCTTGTTGGTGATAACCAGCAGCGAGAAATCAAAGAGTTTGAGAATTTCCTGAAGGGCATCTTTGAACCCATCATGGCCAAGACTAAATAG 2343 0.4259 MIFNTSFSGAGISIVLVYRGFSVSLIHTRLLFRKPRGRTVDDEQHFRQRNQARRRHGSTEARRRDTAKDRGATSRIRAVEHTRHKRTSRIQGMRHEKNAERRRLGETGLCGRSGESSVKKLGLGMYECGDSVKAKQRERAHFQSDIKRNNFWLFLPYSIYPFRKMAKRYQGCAVGIDLGTTYSCVAVWQEEHQRAEIIHNDQGNRTTPSCVAFTDKQRLIGDAAKNQAASNPTNTIFDAKRLIGRKYSDSIIKNDMMLWPFKVIPGVDDKPMIVVTYKGQEKRLCAEEISSMVLTKMRDIAEAYLESPVNNAVITVPAYFSDSQRKATKDAGAIAGLNVMRIINEPTAAAXAYGLDKLADCKEERNIFIFDLGGGTFDVSLLTIKDKVFEVKATAGNTHLGGEDFDNRMVNYFVEEFKRKNNVDISGNSKALRRLRSACERAKRTLSFAFDTVIEIDALYQGIDLYSSLSRAKFEELNMELFRNCMETVDKCLXDAKIDRSCIHDXVLVGGSSRIPKVQQLLQEFFRGKDLCKSINPDEAVAYGAAVQAALLXEDIKKAPELVLLDVTPLSLGIGTTPGDLMDVVIPRNTTIPKKMTKRYTTPEDNMTSVCINVYEGERTRATDNNLLGWFKLSGLPHAPRGHPLYVCFDIDADGILNVSAWEETNCCRNEITITNDNERLSAKEIQRLIEEAENYKVEDANFLEKANALSDLDRYVYKMEKALKDKDICSKLCPLDKEKIESAIAKARNLLVGDNQQREIKEFENFLKGIFEPIMAKTK* 781
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3273 780 PANTHER HEAT SHOCK PROTEIN 70KDA 168 771 IPR013126 GO:0005524|GO:0140662
Amo10g3273 780 PANTHER HEAT SHOCK 70 KDA PROTEIN 168 771 - -
Amo10g3273 780 SUPERFAMILY Actin-like ATPase domain 172 357 IPR043129 -
Amo10g3273 780 PRINTS 70kDa heat shock protein signature 503 519 - -
Amo10g3273 780 PRINTS 70kDa heat shock protein signature 561 580 - -
Amo10g3273 780 PRINTS 70kDa heat shock protein signature 224 232 - -
Amo10g3273 780 PRINTS 70kDa heat shock protein signature 172 185 - -
Amo10g3273 780 PRINTS 70kDa heat shock protein signature 202 214 - -
Amo10g3273 780 PRINTS 70kDa heat shock protein signature 535 555 - -
Amo10g3273 780 PRINTS 70kDa heat shock protein signature 312 332 - -
Amo10g3273 780 PRINTS 70kDa heat shock protein signature 642 658 - -
Amo10g3273 780 PRINTS 70kDa heat shock protein signature 375 385 - -
Amo10g3273 780 Gene3D Actin; Chain A, domain 4 401 484 - -
Amo10g3273 780 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 557 710 IPR029047 -
Amo10g3273 780 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 682 778 IPR029048 -
Amo10g3273 780 Gene3D - 358 532 - -
Amo10g3273 780 SUPERFAMILY Actin-like ATPase domain 362 552 IPR043129 -
Amo10g3273 780 Gene3D - 237 292 - -
Amo10g3273 780 ProSitePatterns Heat shock hsp70 proteins family signature 2. 369 382 IPR018181 -
Amo10g3273 780 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 560 709 IPR029047 -
Amo10g3273 780 Gene3D - 711 780 IPR029048 -
Amo10g3273 780 Pfam Hsp70 protein 173 777 IPR013126 GO:0005524|GO:0140662
Amo10g3273 780 Gene3D - 174 550 - -
Amo10g3273 780 ProSitePatterns Heat shock hsp70 proteins family signature 1. 176 183 IPR018181 -
Amo10g3273 780 MobiDBLite consensus disorder prediction 41 74 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo10g3273 Amo-Chr10 98400681 98404749 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3273 165 778 Calmodulin-binding Proteins AT3G12580 66.074 0.0 818
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3273 K03283 - gmx:102667578 904.434