Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3272 ATGGCCAAGAAATATGAGGGGCTTGCAGTGGGAATCGATCTCGGTACGACATACTCATGTGTTGCTGTGTGGCAGGAAGAACACCAAAGAGCGGAGATCATCCACAATGACCAAGGAAATCGAACAACACCTTCATGTGTTGCTTTCACTGATAAGCAAAGGTTGATCGGTGATGCTGCTAAGAATCAAGCTGCTTCTAATCCAACTAACACTGTCTTTGTTGTTCCCGGGGATGATGACAAACCAATGGTTGCTGTTACACATAAGGGTCAGGAGAAGCATCTTTGTGCAGAAGAAATTTCATCTATGATTCTAACAAAAATGCGTGACATTGCAGAGAAATATTTGCAAGCTCCTGTCAATAATGCAGTAATTACTGTCCCTGCTTATTTCACTGACTCTCAACGCAAAGCCACAAAAGATGCCGGCGCCATTGCAGGCCTCAATGTGATGAGAATCATCAACGAGCCTACAGCTGCAGCAATTGCATATGGCCTTGACAAGCTAGCTGGGTGTAAAGAAGAACGAAATATTTTGATTTTTGACCTCGGTGGTGGTACTTTTGATGTGTCTATCCTTAAGGTTAAAGATAAAGTCTTTGAAGTTAAGGCCACAGCAGGAAACACTCATCTTGGTGGACAAGACTTTGATCACAGAATGGTGAATTACTTGGTACAAGAGTTCAAAAAGAAGAACAAAATGGATATTAGTAACAACTCAAAAGCCTTGAGAAGGTTGAAAAGTGCATGTGAAAGAGCAAAAAGAACACTCTCCTTTGCTTTTGATGCTGCTATTGAACTTGATGCTTTATATCAAGGCATTGATTTTTACTCATCAATCAGCCGTGCCAAGTTTGAGGAACTAAACATGGAACTCTTCAAAGAGTGTATGGAAATAGTAAATCATTGTCTCTATGATGCTGACATGGAAGTGTCTGATATACATGATGTTGTCCTTGTTGGAGGTTCTTCTAGAATTCCCAAAGTGCAGCAACTATTGCAAGAATTCTTCAGAGGGAAGCATCTTTGCAAGAGTATCAACCCTGATGAAGCTGTTGCTTATGGAGCAGCAGTTCAAGCTGCTTTATTGAGTGAAGACATTAAGGTAGCACCAGAACTTGTTCTAATGGATGTTATACCCTTATCACTTGGTATAGGATTAGTAGGAGATCGCATGCATGTAGTGATTCCTAGGAATTCTACCATACCTGCAAGGAGGACAAGAGGATACACAACTAAACAAAACCAAACCAGTGTGGCCATTAATGTTTATGAGGGTGAAAGGACAAGAACAAGTGATAACAACTTGTTGGGTTGGTTTAGTCTTTCTGGTCTTCCTGGTGAATCTCGTTATAATCCTATATATGTATGCTTTGATATTGATGCTGATGGTATTCTGAATGTGTCTGCATGGGAAGAAACCAATGGTTGTAGGAATGAAATTAATATCACAACCAATAATGACAAAGAAAGACTTTCGGCTAAGGAGATTCAGAGATTAATTGAGGAAGCTGAGAAGTACAAGGTTGAAGATGCAGAGTTTTTTGAGAAGGCTGAAGCAATACATGCTTTGGATTGTTATGTTGAAAAGATGGAAAATGCTGTGAAGGATAAAGGGATGATATCTAAACTTTGCCATTTGGACATGGAGGAGATCTGTTCTGCAATTGCTAAGGCCAGAAATCTGCTTAAAGGTGATAACCAGCAGAGAGAAGCTGATGAGTTTAAGAATTGTTTGAAGGAGGTCAAGGGAATCTTTAAACCCATCAAAGCCAAGACTATATTCCTTTCTTCTCTCCTTGTTAAGTGTTAA 1812 0.3996 MAKKYEGLAVGIDLGTTYSCVAVWQEEHQRAEIIHNDQGNRTTPSCVAFTDKQRLIGDAAKNQAASNPTNTVFVVPGDDDKPMVAVTHKGQEKHLCAEEISSMILTKMRDIAEKYLQAPVNNAVITVPAYFTDSQRKATKDAGAIAGLNVMRIINEPTAAAIAYGLDKLAGCKEERNILIFDLGGGTFDVSILKVKDKVFEVKATAGNTHLGGQDFDHRMVNYLVQEFKKKNKMDISNNSKALRRLKSACERAKRTLSFAFDAAIELDALYQGIDFYSSISRAKFEELNMELFKECMEIVNHCLYDADMEVSDIHDVVLVGGSSRIPKVQQLLQEFFRGKHLCKSINPDEAVAYGAAVQAALLSEDIKVAPELVLMDVIPLSLGIGLVGDRMHVVIPRNSTIPARRTRGYTTKQNQTSVAINVYEGERTRTSDNNLLGWFSLSGLPGESRYNPIYVCFDIDADGILNVSAWEETNGCRNEINITTNNDKERLSAKEIQRLIEEAEKYKVEDAEFFEKAEAIHALDCYVEKMENAVKDKGMISKLCHLDMEEICSAIAKARNLLKGDNQQREADEFKNCLKEVKGIFKPIKAKTIFLSSLLVKC* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3272 603 ProSitePatterns Heat shock hsp70 proteins family signature 3. 317 331 IPR018181 -
Amo10g3272 603 Gene3D - 169 343 - -
Amo10g3272 603 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Amo10g3272 603 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 519 593 IPR029048 -
Amo10g3272 603 Gene3D - 76 103 - -
Amo10g3272 603 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 369 521 IPR029047 -
Amo10g3272 603 PANTHER HEAT SHOCK PROTEIN 70KDA 74 592 IPR013126 GO:0005524|GO:0140662
Amo10g3272 603 PANTHER HEAT SHOCK 70 KDA PROTEIN 74 592 - -
Amo10g3272 603 PRINTS 70kDa heat shock protein signature 8 21 - -
Amo10g3272 603 PRINTS 70kDa heat shock protein signature 38 50 - -
Amo10g3272 603 PRINTS 70kDa heat shock protein signature 186 196 - -
Amo10g3272 603 PRINTS 70kDa heat shock protein signature 451 467 - -
Amo10g3272 603 PRINTS 70kDa heat shock protein signature 372 391 - -
Amo10g3272 603 PRINTS 70kDa heat shock protein signature 346 366 - -
Amo10g3272 603 PRINTS 70kDa heat shock protein signature 60 68 - -
Amo10g3272 603 PRINTS 70kDa heat shock protein signature 123 143 - -
Amo10g3272 603 PRINTS 70kDa heat shock protein signature 314 330 - -
Amo10g3272 603 PANTHER HEAT SHOCK PROTEIN 70KDA 4 74 IPR013126 GO:0005524|GO:0140662
Amo10g3272 603 SUPERFAMILY Actin-like ATPase domain 8 168 IPR043129 -
Amo10g3272 603 ProSitePatterns Heat shock hsp70 proteins family signature 2. 180 193 IPR018181 -
Amo10g3272 603 Gene3D Actin; Chain A, domain 4 212 295 - -
Amo10g3272 603 Pfam Hsp70 protein 75 591 IPR013126 GO:0005524|GO:0140662
Amo10g3272 603 Pfam Hsp70 protein 9 74 IPR013126 GO:0005524|GO:0140662
Amo10g3272 603 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 74 - -
Amo10g3272 603 Gene3D - 104 361 - -
Amo10g3272 603 Gene3D - 522 594 IPR029048 -
Amo10g3272 603 SUPERFAMILY Actin-like ATPase domain 173 364 IPR043129 -
Amo10g3272 603 Gene3D - 2 75 - -
Amo10g3272 603 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 372 524 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3272 Amo-Chr10 98387375 98389963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3272 1 592 Calmodulin-binding Proteins AT3G12580 61.613 0.0 746