Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3268 ATGTTGCTATTTCTTGTTCGTTGGTGGATTTATGTGTTTGTGCTGTTAAATTCAGGAGCTGTTAATAGTCAAAATTACCGAACTGTTAGAGACAAAATCCTTCCATTCAACAAAGTTGTTGTCGATTCTTTGGGACATGGCAACTTCTCTACAATTCAATCTGCCATTGATTCTGTCCCTTCCAACAATAAGTATTGGATTTTAATCAATGTCACTGCTGGTATTTACAGGGAGAAAGTGACGATTCCAATTGATAAACCATACATAATATTGAAGGGAAGTGGAAAGATGAGAACGTGGGTTGAATGGGATGACCATAATACAACAGCTCAGAGCCCCACAGTTGGATTTTTCGGATTGCAAGATACTTTGTGGGATAATTATGGAAAACATTACTATAAATTTTGTACTATTGAAGGTGCTGTTGATTTTATTTTCGGTGCTGGCCAGTCATTATTTGAGAGGTGTAGCATAAATGTGATTGGAAGGGCATTAGGAAAATGGTTTGTAGGATATATAACAGCACAAGCAAGAGAAAATCCAAAAGATTCAAATGGATTTGTGTTCAAGAATTGCAATGTCTCTGGAAATGTATGGCCAACATTATTCAACCCGCTGGTTGGGACCTATGGGATTCCTCTCAACATGAAGTATGGCAATTTTGGACCAGGTTCTAATACCTCCAAACGAGTAAATTGGACTACAACGTTGGATTTAAAGACGGTTGATATGATGACAAATATAAGTTTCATAGACTCTGAAGGATGGGTTCATCAATACCAACAGTTTTAG 792 0.3725 MLLFLVRWWIYVFVLLNSGAVNSQNYRTVRDKILPFNKVVVDSLGHGNFSTIQSAIDSVPSNNKYWILINVTAGIYREKVTIPIDKPYIILKGSGKMRTWVEWDDHNTTAQSPTVGFFGLQDTLWDNYGKHYYKFCTIEGAVDFIFGAGQSLFERCSINVIGRALGKWFVGYITAQARENPKDSNGFVFKNCNVSGNVWPTLFNPLVGTYGIPLNMKYGNFGPGSNTSKRVNWTTTLDLKTVDMMTNISFIDSEGWVHQYQQF* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3268 263 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 115 - -
Amo10g3268 263 PANTHER PECTINESTERASE 10-RELATED 115 196 - -
Amo10g3268 263 ProSitePatterns Pectinesterase signature 2. 138 147 IPR033131 -
Amo10g3268 263 PANTHER PECTINESTERASE 10-RELATED 13 115 - -
Amo10g3268 263 PANTHER PECTINESTERASE 10-RELATED 218 259 - -
Amo10g3268 263 Gene3D - 116 202 IPR012334 -
Amo10g3268 263 Pfam Pectinesterase 39 115 IPR000070 GO:0030599|GO:0042545
Amo10g3268 263 Pfam Pectinesterase 117 197 IPR000070 GO:0030599|GO:0042545
Amo10g3268 263 Gene3D - 36 115 IPR012334 -
Amo10g3268 263 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 115 196 - -
Amo10g3268 263 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 218 259 - -
Amo10g3268 263 SUPERFAMILY Pectin lyase-like 38 258 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3268 Amo-Chr10 98352406 98354404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3268 37 257 Carbohydrate Esterase AT5G47500 29.508 6.97e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3268 - - ahf:112786588 389.423