Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3256 ATGGCGAAAAGACATCGGGGATGTGCAGTGGGAATCGACCTTGGTACGACTTACTCGTTGGTGATCATCCACAATGACCAAGGCAATAGAACAACACCATCATGTGTTGCTTTTACTGATAAGCAAAGGTTGATTGGTGATGCTGCTAAGAACCAAGCTGCTTCCAATCCAGCTAACACTGTCTTTGATGCTAAAAGGTTGATTGGTAGGAAATATAGTGACTCCATTATCAAGAATGACATGATGATGTGGCCATTTAAAGTCATTCCTGGTGTTGATGACAAACCAATGATTGTTGTTACATATAAGGGCCAGGAGAAGCGTCTTTTTGCAGAAGAAATTTCCTCTATGATTCTAACAAAAATGCGTGACATTGCAGAGAAATATTTGGAAGCTCCTGTCAATAATGCAGTAATTACTGTGCCTGCTTATTTCAGTGACTCTCAACGTAAAGCCACAAAAGATGCAGGTGCCATTGCAGGCCTCAATGTCATGAGAATTATCAATGAGCCTACGGCTGCAGCAATTGCATATGGCCTGGACAAGCTAGCTGATTATAAGGTCTTTGAAGTTAAGGCTACTGCAGGAAATACTCACCTTGGCGGAGAAGACTTTGATAACAGGATGGTGAATTACTTCGTAGAAGAGTTCAAAAGGAAGAACAATGTGGATATTAGTGGGAATTCAAAAGCCTTGCGAAGGTTGAGAAGTGCATGCGAAAGGGCAAAAAGGACACTCTCATTTGCTTTTGATACTGCTATTGAAATTGATGCTTTATATCAAGGCATTGACCTTTATTCATCACTCAGCCGTGCCAAGTTTGAGGAACTAAACATGGAACTCTTTAGAAATTGTATGGAAACAGTAGATAAGTGTCTCACTGATGCTAAGATAGACAGGTCTTGTATACATGATGCTGTTCTTGTTGGCGGCTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCAGGAATTCTTCAGAGGTAAGGATCTTTGCAAGAGTATCAACCCAGATGAAGCTGTTGCTTATGGGGCAGCAGTTCAGGCTGCTTTATTGAGTGAAGACATCAAGAAAGCTCCAGAACTGGTTCTACTAGATGTTACACCCCTGTCGCTTGGTATTAAGATAAGGACATCACCAACTGTGGACCTCATGAGTGTAGTGATTCCTAGGAATACTACCATACCTGCAAAGGGAACAAAAAGATACTTTACATCTAAAGATAACCATACCATTGTTCCAATAAGTGTTTATGAGGGTGAGAGGATAAGAGCCACAGATAACAACTTGCTTGGTTGGTTTAATCTTTCTGGTCTTCCTCATGCTCCTCGTGGTCATCCTTTATATGTATGCTTTGATATAGATGCTGATGGTATCCTAAATGTATCTGCCTGGGAAGAAACCAATCGTTGTAGGAATGAAATTAATATAACCAGTGACAAGGAAAGACTTTCAGCCAAGGAAATTCAAAGACTAATTGAGGAAGCTGAGAATTACAAGATTGAAGACGAAAAGTTCCTTGAGAAGGCTAAAGCAATGCATGCTTTGGATGATTATGTTTACAAGATGGAAAAGGCTCTAAAGGATAAAGACATCAGCTCTAAGCTTTGCCCTCTGGACAAGGAGAAGATCGAGTCTGCAATTGCTAAGGCCAGAAATCTGCTTGTTGGTGATAACCAGCCGCAAGAAATCAAAGAGTTTGAGAATTTCCTGAAGGGCATCTTTGAACCCATCATGGCCAAGACTAAATAG 1752 0.4098 MAKRHRGCAVGIDLGTTYSLVIIHNDQGNRTTPSCVAFTDKQRLIGDAAKNQAASNPANTVFDAKRLIGRKYSDSIIKNDMMMWPFKVIPGVDDKPMIVVTYKGQEKRLFAEEISSMILTKMRDIAEKYLEAPVNNAVITVPAYFSDSQRKATKDAGAIAGLNVMRIINEPTAAAIAYGLDKLADYKVFEVKATAGNTHLGGEDFDNRMVNYFVEEFKRKNNVDISGNSKALRRLRSACERAKRTLSFAFDTAIEIDALYQGIDLYSSLSRAKFEELNMELFRNCMETVDKCLTDAKIDRSCIHDAVLVGGSSRIPKVQQLLQEFFRGKDLCKSINPDEAVAYGAAVQAALLSEDIKKAPELVLLDVTPLSLGIKIRTSPTVDLMSVVIPRNTTIPAKGTKRYFTSKDNHTIVPISVYEGERIRATDNNLLGWFNLSGLPHAPRGHPLYVCFDIDADGILNVSAWEETNRCRNEINITSDKERLSAKEIQRLIEEAENYKIEDEKFLEKAKAMHALDDYVYKMEKALKDKDISSKLCPLDKEKIESAIAKARNLLVGDNQPQEIKEFENFLKGIFEPIMAKTK* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3256 583 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 485 581 IPR029048 -
Amo10g3256 583 Gene3D - 485 582 IPR029048 -
Amo10g3256 583 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Amo10g3256 583 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 348 482 IPR029047 -
Amo10g3256 583 SUPERFAMILY Actin-like ATPase domain 186 352 IPR043129 -
Amo10g3256 583 SUPERFAMILY Actin-like ATPase domain 8 182 IPR043129 -
Amo10g3256 583 Gene3D - 10 178 - -
Amo10g3256 583 Gene3D - 337 347 - -
Amo10g3256 583 Coils Coil 489 509 - -
Amo10g3256 583 PANTHER HEAT SHOCK PROTEIN 70KDA 186 574 IPR013126 GO:0005524|GO:0140662
Amo10g3256 583 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 186 - -
Amo10g3256 583 PANTHER HEAT SHOCK 70 KDA PROTEIN 186 574 - -
Amo10g3256 583 Pfam Hsp70 protein 188 580 IPR013126 GO:0005524|GO:0140662
Amo10g3256 583 Pfam Hsp70 protein 9 183 IPR013126 GO:0005524|GO:0140662
Amo10g3256 583 Gene3D Actin; Chain A, domain 4 202 285 - -
Amo10g3256 583 PRINTS 70kDa heat shock protein signature 27 39 - -
Amo10g3256 583 PRINTS 70kDa heat shock protein signature 335 355 - -
Amo10g3256 583 PRINTS 70kDa heat shock protein signature 361 380 - -
Amo10g3256 583 PRINTS 70kDa heat shock protein signature 8 21 - -
Amo10g3256 583 PRINTS 70kDa heat shock protein signature 137 157 - -
Amo10g3256 583 PRINTS 70kDa heat shock protein signature 303 319 - -
Amo10g3256 583 PRINTS 70kDa heat shock protein signature 445 461 - -
Amo10g3256 583 PRINTS 70kDa heat shock protein signature 49 57 - -
Amo10g3256 583 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 360 516 IPR029047 -
Amo10g3256 583 Gene3D - 187 336 - -
Amo10g3256 583 PANTHER HEAT SHOCK PROTEIN 70KDA 4 186 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3256 Amo-Chr10 98244298 98246247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3256 1 581 Calmodulin-binding Proteins AT3G12580 61.613 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3256 K03283 - gmx:102667578 807.749