Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3254 ATGGATTCTTCTCTACTCTTCAACTTATTATCAGCATTTATCTCCTTAATTATTCTCTTCATCACTGCTTCACTCAAAATAGCAACAAACCATAAAAAGAAAAGTAGTGCAACTTTAAACATACCTCCAGGACCATGGAAACTACCCATTATAGGAAACATAATACCCCATCTTGTTACATCCACACCACATAGAAAACTAAGAGATTTGGCCATCAAATATGGACCACTGATGCACCTTCAACTTGGTGAAATCTCTGCCATTGTTGTTTCCTCTCCAGAGTATGCAAAGTTGGTAATGAAAACACATGATGTTATCTTTGCTTCCAGGCCTAAATTTCTATTCTCAGAGATTGTGACATATAATTGCACAGATATAGCTTTCTCACCATATGGAAATTATTGGAAGCTACTAAGGAAAGTTTCCACATTAGAGCTTTTCAGTCCAAAGCGTGTGAATTCTTTCAAATCAATAAGAGAAGAAGAGTTCAATAGTCTTGTCAAAAGGATTATGATTGACTCGAAAACACAGAGCATGATCAACCTCACCGAAGAAGTGATTTCAACAACATATGCAATCGTTTCAAGGGCTGCGTTTGGATCAAGATGCAAAGATCAAGAGGAGTTCATAACAGTTGCAAAAGAAGTAGCAATGATTGGGGCGGGTTTTGACATAGGAGAGTTGTTTCCTTCTTCCAAATGGATTCAACTTGTGAGTGGTTTGAGACCTAAGCTTGAGAGGTTGCGAACAAAAAGTGATAGGATATTGAGAAACATCATCAATGACCACAAAGATGTTGAAGAAGTCCAAGGTGGTGATCATGATTCAAATGAAGATCTTGTAGATGTTCTACTAAAATTTGTGGATGGTGCTAATGGTATCAATCAAGATATTTGCTTCACTGAGGACAACATCAAGGCTATAATCCTGACCATTTTTACTGCTGGAGGGGAGACAACAGCAACAACCATAGATTGGGTAATGTCAGAGATGATGAAGAATCCAAGAATAATGCAAAAAACACAAGCTGAGGTTAGGGATATATTCAACAAAAGTGGAAGGGTTGACGAGACTTGTATCCATGAACTCAAGTATTTGAACTCAGTTGTGAAAGAAACACTAAGGTTACACCCTCCACTTCCCCTCTTACTTCCAAGAGAATGTGGAAAACAAGAATGTGAGATCAATGGATATCACATACCCTACAAAAGTAAGGTGATAGTGAATGTTTGGGCTATTGGAAGAGATCCAAACTACTGGACCGAACCTGAGAAGTTTTATCCGGAGAGATTCATGGAAAATAATTCTTCTATTGATTATAAAGGAAATAATTTTGAGTACCTCCCATTTGGAGGTGGAAGAAGAATATGTCCTGCAAGCATGTTTGGTATAATGAATGTTGAGTTGACACTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCCAATGAAATGAAATTTGATGATGTGGACATGACTGAACAAGTTGGAATTACTGCAAAAAGAGAGCAAGACCTCTACTTGATTCCCATCACTTCTCGTCCTTTGCTTTTACCATAA 1563 0.3762 MDSSLLFNLLSAFISLIILFITASLKIATNHKKKSSATLNIPPGPWKLPIIGNIIPHLVTSTPHRKLRDLAIKYGPLMHLQLGEISAIVVSSPEYAKLVMKTHDVIFASRPKFLFSEIVTYNCTDIAFSPYGNYWKLLRKVSTLELFSPKRVNSFKSIREEEFNSLVKRIMIDSKTQSMINLTEEVISTTYAIVSRAAFGSRCKDQEEFITVAKEVAMIGAGFDIGELFPSSKWIQLVSGLRPKLERLRTKSDRILRNIINDHKDVEEVQGGDHDSNEDLVDVLLKFVDGANGINQDICFTEDNIKAIILTIFTAGGETTATTIDWVMSEMMKNPRIMQKTQAEVRDIFNKSGRVDETCIHELKYLNSVVKETLRLHPPLPLLLPRECGKQECEINGYHIPYKSKVIVNVWAIGRDPNYWTEPEKFYPERFMENNSSIDYKGNNFEYLPFGGGRRICPASMFGIMNVELTLAFLLYHFDWKLPNEMKFDDVDMTEQVGITAKREQDLYLIPITSRPLLLP* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3254 520 PANTHER CYTOCHROME P450 71B11-RELATED 13 514 - -
Amo10g3254 520 SUPERFAMILY Cytochrome P450 42 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 514 - -
Amo10g3254 520 Gene3D Cytochrome P450 26 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 Pfam Cytochrome P450 42 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g3254 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3254 Amo-Chr10 98220003 98222598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3254 16 511 Cytochrome P450 AT3G26300 41.717 5.34e-131 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3254 - - gmx:100801936 677.167