Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3244 ATGGTCATTAGGCTTAAGAATGCCTATGTTGCTCTCCAAGCATGGAAACAAGCTATCTACTCTGACCCTTACAACACAACCGCTAATTGGGTTGGCAGCGATGTTTGCTCCTACAATGGCGTCTTCTGCGCTCCCGCTCTCGACGATCCCTCCCTCGACGTCGTCGCCGGCATCGATCTTAATCATGCTGACATTGCCGGACACCTTCCCGGAGAGTTAGGCCTCTTGACCGACTTGGCGCTTTTCCACATCAATTCCAACAGGTTCTGCGGAATCGTACCTCCATGCATGGAGAATCTAACTCTCATGCACGAATTTGACATAAGTAACAACCGATTCGTTGGTGGATTTCCCAACGTGGTTCTCAAATGGTCAGACATGAAGTATCTGGATCTTAGATACAACGATTTCGAAGGGTCTTTGCCGCCTCAACTGTTCGAGATGGATCTGGATGCAATCTTCTTGAACAATAACCGTTTCACCTCTGTTCTCCCTGCCACCCTCAGCAAATCCAAGGCTTCGGTTATTACTTTCGCTAACAATAAGTTCACAGGCTGCATTCCGAAATCGATTGGAAAGTTGAACAAGTTGAATGAGATTCTCTTCATGGGCAACAAACTGGGTGGTTGCTTCCCTCAAGAGATTGGAATGATGGAGGATTTGAATGTTTTGGATCTTAGCGACAACAATTTTGTAGGTACTCTGCCTAACATGACGGGTTTGCAGAACGTGGAGGTTATAGACATTGCAAGGAATGAGCTTAGCGGTTATGTGTCTGATTCTGTTTGTCAATTACCTTCTCTGAAGAACTTCACTTACTCTGATAATTACTTCAACGGGGAAGCTCCAGCTTGTGTTGCTGCTGTTGCTGCTTATAAGGGTTCAATTAGTACAACTGTTTTTGATGACTCAGGAAATTGTTTGACTGGAAGGAAGAATCAAAAGAAATCTAAGGTGTGTTTGCCAGTACTAACACGGCCTGTAGATTGTAGTAAGGCTTGTGGTGACGGAGAAGGAGGTGGTAATAATAATAAGGCCCCCTCGTTAACACCGAAAAAGTCACCTCCAAAGCCAAAGGTTAGTAAACCACATTCACCACCACCACCATCACCACCACCAGTTAGTTCTCCTCCTCCTCCTCCATCCCCTGTTTACTCACCACCACCACCACCTACATACTCTCCTCCTCCTCCTCCACCAGTGCACTCTCCACCGCCACCAACTCAATCACCTCCCCCACCACCACCAGTTTACTCTCCCCCACCTCCAACTATGTCACCTCCTCCTCCTCCACCAGTTTTCTCTCCACCACCACCAACTCAGTCCCCTCCTCCACCCCCTGTTTACTCTCCACCACCACCAACTCAGTCCCCTCCTCCTCCTCCACCAGTTTACTCCCCACCACCACCAACTCAGTCACCACCACCTCCACCCCCGGTTTACTCACCGCCACCACCAACTCAGTCACCTCCTCCTCCACCCCCAGTGTACTCTCCACCACCACCAACTCGGTCACCACCACCTCCCCCAGTTTACTCGCCACCACCACCAACTTACTCACCTCCTCCTCCAACCCCAGTATACTCACCACCACCACCAACTAAGTCACCTCCTCCACCCCCAGTTTACTCGCCACCACCACCAGCATGGGATGATGATGTCGTCCTCCCACAACACTTTGGATCTGCATACAGATCACCTCCTCCACCGGCTATTATTGGATACTAA 1728 0.4954 MVIRLKNAYVALQAWKQAIYSDPYNTTANWVGSDVCSYNGVFCAPALDDPSLDVVAGIDLNHADIAGHLPGELGLLTDLALFHINSNRFCGIVPPCMENLTLMHEFDISNNRFVGGFPNVVLKWSDMKYLDLRYNDFEGSLPPQLFEMDLDAIFLNNNRFTSVLPATLSKSKASVITFANNKFTGCIPKSIGKLNKLNEILFMGNKLGGCFPQEIGMMEDLNVLDLSDNNFVGTLPNMTGLQNVEVIDIARNELSGYVSDSVCQLPSLKNFTYSDNYFNGEAPACVAAVAAYKGSISTTVFDDSGNCLTGRKNQKKSKVCLPVLTRPVDCSKACGDGEGGGNNNKAPSLTPKKSPPKPKVSKPHSPPPPSPPPVSSPPPPPSPVYSPPPPPTYSPPPPPPVHSPPPPTQSPPPPPPVYSPPPPTMSPPPPPPVFSPPPPTQSPPPPPVYSPPPPTQSPPPPPPVYSPPPPTQSPPPPPPVYSPPPPTQSPPPPPPVYSPPPPTRSPPPPPVYSPPPPTYSPPPPTPVYSPPPPTKSPPPPPVYSPPPPAWDDDVVLPQHFGSAYRSPPPPAIIGY* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3244 575 Pfam Leucine rich repeat N-terminal domain 9 43 IPR013210 -
Amo10g3244 575 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 4 549 - -
Amo10g3244 575 MobiDBLite consensus disorder prediction 334 575 - -
Amo10g3244 575 Gene3D Ribonuclease Inhibitor 7 305 IPR032675 -
Amo10g3244 575 MobiDBLite consensus disorder prediction 351 552 - -
Amo10g3244 575 PRINTS Proline rich extensin signature 378 390 - -
Amo10g3244 575 PRINTS Proline rich extensin signature 355 371 - -
Amo10g3244 575 PRINTS Proline rich extensin signature 395 416 - -
Amo10g3244 575 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 4 549 - -
Amo10g3244 575 SUPERFAMILY L domain-like 9 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3244 Amo-Chr10 98124810 98127075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3244 4 543 Trihelix Transcription Factor Family AT3G19020 51.068 5.13e-162 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3244 - - aip:107621173 691.419