Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3225 ATGATGAGTTCAATAACCACCAAGGAGGAGTACGATGATGCTTTCACCAAAGCTGCTTCCTTCGCATTTGCTCAGGTGTTTCCTGCAATCTTGAACGCTGCTGTTGATATGAACTTGTTTGATATCATATCAAAGTCAGAGAGTCCATTAGGCATGTCAGCTTCTGAGATTGCATCTAAGATTCCAAAGCAACACAGTGAAATGGGTAGCAGACTTGAACGCATGCTGCCATCATTGGTGGCTCGTTCTCTTCTGACTTGCTCCATTCGCACCATTAATGAAGATGGTGACACTGAAAGAGTTTATGCAGTTTCTCCTGTTGGACAATACTATACAAGTAGTCATCATGATGAACAAGGAGGCTCCTGGATTGCAATGTCAACTGTAAGCTACCAAGATACAAAAGATGCAATATTGGATGCTAACAATCACAATCATTTCCAAAAAATGTACGGAAAGATGGCATTTGAATATATGGAGACAGACACAGAGTTAGGTAACCTTTTCGGACAAGCAATGGCACAAGCTGGGTCTTTAGGATTGAAACAACTTCTTAATGCATATAAAGGCTTTGAGGGAATATCAACTTTAGTTGATGTTGGAGGTGGATATGGACAAACTTTGAAACAAATTCTCTTGCAATATCCATCAATTAAAGCAATTAATTTTGATTTGCCTCATGTTGTTAAAAACGCACCCCCTCATCCAGGGATAGAGCATATCGGAGGAGACATGTTTAAAAGTGTTCCAAAAGCTGATGCCATTTTACTCAAGCATGTATGTCATAACTGGGAAGATGAAGAATGTGTCAAGTTTTTAAGAAACTGCTATGAAGCTTTGCCACCACATGGGAAGGTCATAGTTTTGGATGCTTTATTGCCAGAAATTCCAAAATCAACATCGTTTAAGGATACACAGGCTGTGGATCTCGATTTTCTTATGTTTCTAGTTCACGGTGGAAAGGAAAGAACCCAAAAACAATTTGAGAAATTATGCAAGACCTCAGGATTTTCACGATTTCAGCATATATCAATGATGAGTTCCACCACCAATAATAATAATAATTCCAAGGAGGATTACGATGATGCTTTCACCAAAGCTGCTTCATTCGCATTTGCTCAGGTGTTTCCTGCAATCTTGAACGCTGCTGTTGATATGAACTTGTTTGATATCATATCAAAGGCAGAGAGTTCGTTAGGCATGTCAGCTTCTGAGATTGCATCTAAGATTCCAAAGCAACACAGTGAGATGGGTAGCAGACTTGAACGCATGCTGCCATCATTGGTGGCTCGTTCTCTTCTGACTTGCTCCATTCGCACCATTAATGAAGATGGTGACACTGAAAGAGTTTATGCAGTTTCTCCTGTTGGACAATACTATACAAGTAATCATCACGATGAACAAGGAGGCTCCTGTATTGCATTGAAAGATATGAAAGATGCAATATTGGATGCTAACAATCACAACCACTTCCAAAGAATGTATGGAAAGATGGCATTTGAATATATGGAAACAGACAGAGAGTTAGGTAACCTTTTCGGAGAAGCAATGTCTCAAGCAGGGCCTTTAGGAGTGAAATCAATCCTTGATGCATATAAAGGAGGCTTTGATGGAATATCAACGTTAGTTGATGTAGGAGGTGGATATGGACAAGTCCTCAAACAAATTCTCTTCCAATATCCATCAATTCAAAAAGCAATTAATTTTGATTTGCCTCATGTTGTGAAAAACGCACCCCCTCATCCAGGGATAGAGCATATCGGAGGAGACATGTTTAAAACTGTTCCAAAAGCTGATGCCATTTTACTCAAGCATGTATGTCATAATTGGAAAGATGAAGAATGTGTCAAGGTTTTAAGAAACTGCTATGAAGCTTTGCCACCACATGGGAAGGTCATAGTTTTGGATACTTTATTGCCAGAAATTCCGAAATCAACATCGTTTAAGGATACTCAGGCTGTGGATCTCGATTTTCTTATGTTTCTAGTTCTCGGTGGAAAGGAAAGAACCCAAAAACAATTTGAGAAATTATGCAAGATCTCAGGATTTTCCCGATTTCAGGTTGCTTGCAATGATTCCTCAAATATCCTTGCAAGAGAATCATTTTAG 2109 0.3926 MMSSITTKEEYDDAFTKAASFAFAQVFPAILNAAVDMNLFDIISKSESPLGMSASEIASKIPKQHSEMGSRLERMLPSLVARSLLTCSIRTINEDGDTERVYAVSPVGQYYTSSHHDEQGGSWIAMSTVSYQDTKDAILDANNHNHFQKMYGKMAFEYMETDTELGNLFGQAMAQAGSLGLKQLLNAYKGFEGISTLVDVGGGYGQTLKQILLQYPSIKAINFDLPHVVKNAPPHPGIEHIGGDMFKSVPKADAILLKHVCHNWEDEECVKFLRNCYEALPPHGKVIVLDALLPEIPKSTSFKDTQAVDLDFLMFLVHGGKERTQKQFEKLCKTSGFSRFQHISMMSSTTNNNNNSKEDYDDAFTKAASFAFAQVFPAILNAAVDMNLFDIISKAESSLGMSASEIASKIPKQHSEMGSRLERMLPSLVARSLLTCSIRTINEDGDTERVYAVSPVGQYYTSNHHDEQGGSCIALKDMKDAILDANNHNHFQRMYGKMAFEYMETDRELGNLFGEAMSQAGPLGVKSILDAYKGGFDGISTLVDVGGGYGQVLKQILFQYPSIQKAINFDLPHVVKNAPPHPGIEHIGGDMFKTVPKADAILLKHVCHNWKDEECVKVLRNCYEALPPHGKVIVLDTLLPEIPKSTSFKDTQAVDLDFLMFLVLGGKERTQKQFEKLCKISGFSRFQVACNDSSNILARESF* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3225 702 SUPERFAMILY "Winged helix" DNA-binding domain 9 114 IPR036390 -
Amo10g3225 702 CDD AdoMet_MTases 541 634 - -
Amo10g3225 702 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 18 341 - -
Amo10g3225 702 PANTHER O-METHYLTRANSFERASE 355 693 IPR016461 GO:0008168
Amo10g3225 702 PANTHER O-METHYLTRANSFERASE 18 341 IPR016461 GO:0008168
Amo10g3225 702 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 345 IPR029063 -
Amo10g3225 702 Gene3D - 375 528 IPR036388 -
Amo10g3225 702 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 357 IPR016461 GO:0008168
Amo10g3225 702 Pfam O-methyltransferase domain 477 684 IPR001077 GO:0008171
Amo10g3225 702 Pfam O-methyltransferase domain 131 338 IPR001077 GO:0008171
Amo10g3225 702 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 355 693 - -
Amo10g3225 702 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 477 690 IPR029063 -
Amo10g3225 702 CDD AdoMet_MTases 196 288 - -
Amo10g3225 702 Gene3D - 26 184 IPR036388 -
Amo10g3225 702 Gene3D Vaccinia Virus protein VP39 166 343 IPR029063 -
Amo10g3225 702 Pfam Dimerisation domain 379 428 IPR012967 GO:0046983
Amo10g3225 702 Pfam Dimerisation domain 30 79 IPR012967 GO:0046983
Amo10g3225 702 Gene3D Vaccinia Virus protein VP39 510 691 IPR029063 -
Amo10g3225 702 SUPERFAMILY "Winged helix" DNA-binding domain 359 464 IPR036390 -
Amo10g3225 702 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 368 702 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3225 Amo-Chr10 98001121 98028888 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3225 361 691 Monolignol Biosynthesis Gene Families AT5G54160 46.667 8.45e-92 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3225 K13066 - aip:107621172 408.297