Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3220 ATGGCATCATCTTATTGTGACTGGAATTGGGCAGCATATCAAGCTAGATTTCTTGGCATACCAGGAGAGAGAGTTGCAGAGGAGTGCTTAATTAGGACTGCTCAACTAAGTTTCGTAGTTGGATCTCATATTTGGATTGAGGACCCTGATGAAGCTTGGATTGAAGGAGAAATATTGGAATCTAAGGGCAATGAGATCACAGTTAATTGTGCTTCAGGGACAAAGGTTATTAGTAAATCGTCTCATATCTATCCCAAAGATCCTGAGTTCCCACCAAATGGAGTGGATGATATGACAAGGTTGGCATATCTGCATGAACCAGGGGTACTTCAGAATTTGCATGTTCGATATGAAGTAAATGAAATATATACTTACACAGGAAACATATTGATAGCTGTAAACCCTTTCCAAAGATTACCTCATTTATATTCGAGGGAAACAATGGAGAAGTATAAAGGCGCGGCTTTCGGTGAGAAGAGCCCAAACCCCTTTGCCATTGCTGATTCTGCATACAGGAAGATGATAAATGAAGAAACAAGCCAATCCATTTTAGTTAGTGGAGAAAGTGGAGCTGGTAAAACAGAAAGTACAAAAATGCTTATGTGTTATCTTGCTTATATGGGAGGCAGAGCAGCTAATGAAGGACGCTCAGTTGAGCAACAAGTCTTGGAGTCCAATCCTGTTTTAGAAGCATTTGGCAACGCCAAGACTGTTAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACTTATTTGCTGGAACGGTCTCGTGTCTGTCAGGTTTCTGATCCTGAGAGAAACTATCATTGCTTTTATATGCTTTGTGCTGCACCAAAAGAGGATGTTGAAAAGTACAAATTGGGAAACCCAAGAACTTTTCATTACCTAAATCAATCAAATTGCATTGAGTTGCAAGGGTTGGATGATTCTAAGGAATACCTTGCAACTAGAAGAGCTATGGATGTTGTTGGGATCAATGGTAATGAGCAGGATGCCATATTTCGAATAGTAGCTGCAGTGTTGCACTTGGGAAATATTGAATTTGTTAAGGGGGACGATGAAGAGACTGATTCCTCTCAACCTAAGGATGACAAATCTCGTTTCCACCTTAAAACTGCAGCTGAGCTTTTGATGTGCGACGAGAAATCCCTTGAGGATTCATTTTGCAAACGTGTTATGGTCACTCGCGGCGATAAAATAACAAAGTCACTTGATCCCGTTGCTGCAAGTCTCAGCAGAGATGCTTTGGCTAAAATTATTTATTCAAGGCTTTTTGACTGGATTGTGGACAAGATTAACAATTCTATTGGGCAAGATCCACATTCAAAGAACTTAATCGGAGTCTTAGATATATACGGATTTGAAATTCTTAATTTCTTATGTGTGGATAATGATGCGTTAGTTCATATCATTAACTTCTTACTTAGAAAAATTACACTCTACAAATGGTTCTTATGCAGTTTTGAGCAATTCTGTATCAATTTGACTAACGAGAAATTGCAACAGCATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAAGAATATACAAAGGAAGAAATCAATTGGAGTTATATAGAGTTCGTTGATAATCAAGATGTTCTTGATCTCATAGAAAAGATGAGGCATGCATGTTTCCAAGATCAACCCATGAAACATTTGCCGAAAAGCTGTATCAAACATTTAAAGACAATAAACGGTTCAGCAAGCCAAAGCTGTCTCGTGACTTATCAAACAGACCTTTTCCTTGATAAGAACAAAGACTATGTTGTTCCAGAGCATGCTGCCTTACTCAATGCTTCAAAGTGCAACTTCGTTTCAGGGTTGTTCCCTCCTTTGCCTGAGGAAACTTCCAAATCAACCAAGTTTGCTTCTGTTGCAACTCAGTTTAAGCAACAACTGCAGTCTCTGCTGGAAACACTAAACGCTACTGAGCCACACTACATTCGCTGTGTAAAGCCCAACAACCTTCTTAAGCCTGGAATATTTGAGAACAGTAATGTGTTGCAGCAGCTACGATGCGGGGGAGTAATGGAGGCAATAAGAATTAGTTGTGCCGGATATCCTACTAGGAAGAACTTTGACGAATTCATTCGACGATTTAGTATCCTAGAACCTAAGGTTCTTACATCATGCCCTGATGAAATGACCAGTTGCAAGATGCTTCTTGACAAAGTGAACCTTAAAGATTATCAGATTGGAAAGACAAAAGTGTTTTTGAGAGTAGGACAAATGGCACAACTAGATGCCTGTAGAGCAGAAGTATTAGGAAGATCTGCAACCATTATTCAAAGAAAAGTTTGCACATATCTTTGCCAAAAACACTACAACACATTGCGGATGTCTGCAATACAACTACAAAGGGTAGTCAGAGGACAACTAGCACGCTTTCATTATGAAAAAATGAGGAGGGAAGATGCTTCTGTGAAAATTCAAAAGAATCTTCGCATGCATCTTTCCAAGACTGCTTACCAAGCCCTCAAGGCTTCAGCTGTATTTATTCAGACTGCTATGAGAGGCAAGACTGCTAGAAATCAACTCAGATATAGGAAGTTAACCAGAGCTGCTGTAATCATTGAGAGACACGGTAGAGGTTACATAGCTCGTTCTCATTACAAACGTTTAAAGAAAGCCGCTATTTTTGCACAATGTTCATGGAGGAGAACCATGGCTCGTAGAGAACTTCGAAAGCTTAGAATGGCTGCTAAGGAAGCCAAGGCTCTTGAAGCTGCGAAAAAAGAACTTGAAAAGCAAGTGGAAGAATTGACCAAGACACAGGAAAATGAAAAACTACAATCAGCTTTGCATGAGATGGAGCTTCAACTCAAAGAAACTCAAGCTTCCTTGCATGAGATGGAGTCATTGCTTCTTAAGGAACGTCAGGCCCCTAAAACTGCCGATACAACACCTATGCAAGTTATTCAATCTAACGGAGCTGATAATGATATTGAATTGATTAGCAAGCTTACAGCAGAAAATGAACAACTCAAGGGTTTGGTTAATTCATTGGAAAAGAAAAGCACGCTAGAGATTCCCAGTAATATGACTGAGAATGAAGTGATCAATATGCTTAGTTCGGAGAGGGAACTTCTTAAGGTTAGTTCACTTGAACAGAAAATTAATGAAACAGAAAGGAAATATGAAGAATGTAGCAAACTTAGTGAGGAACGCATGAATCAAATCATAGAGACCGAAAGCAAGATAATTGAGCTAAAGACATCAATGCAAAGGCTTGAAGAAAAAGTTTCTGATATGGAAACTGAGAATCAAGTTTTAAGGCAGAAAAGCCTTTCGAGTTCATCATCAAAGAAAATGTCAGAAAAGAATCCATCTCAGGCATCAACATCAGCAAGTTCAGGCCAGACAAAGACATTTGGAACCGATGCCGATAGCAAAGTAAGGACATCTCACATGGAGAGGCATCTTGTATGCTTCTACAAGAAATTATTATTTCACATTCCAATCATTCTAACTGAGTCACATTTTCATGTGTTTGACTACTGTGTGCAGGAGAGCATCGAAACTCTTTTCAAGTGCATCCAAAAAGATCTTGGATTCTCGGAAGGAAAACCCGTGGCAGCATTCACCCTTTATAACTGTCTGCTACATTGGAAATGTTTTGAAGCAGAAAAGACAAGTATATTTGATCGTCTTATTCAGCTGATTGGATCTGCAATAGAGGATCAAGATAACAATGGTTGCATGGCTTATTGGTTGTCCAACACATCTGCTTTGTTGTTCCATCTCCAGCGAACTCTTCGAGTCCCTACAGCACGAAAGCCACCCACTCCGACATCTTTCTTTGGAAGAGTCACTCAAGGATTTCGGTCATCGAAAAGTCTTTCCAGTGGTTCATTTGATGTGGAGCATCAAGTTGATGCCAAGTACCCTGCTTTACTTTTCAAGCAGCAACTTGCAGCTTACGTTGAGAAGATTTATGGAATTCTTAGAGAAAATTTGAAGAAAGACATATCTCCTCTAATTTCTGCTTTCATTCAGGCGCATGGAAAGTCAGATGATAACAACCATCCAGCTGCTTCATGGACTGCCATTGTACAATGCATTAACAGATTTCTCAATATTTTCAAAGAAAACCATGTGCATCCAGTTCTCGTTCAGAAGATATTCAGCCAAGTTTTTCAACATATCAATGCGGAAATCTTTAATAGCCTTGTTTCACAAAGAGAATGTTGCACATTCAACAATGGACAACTTATCAAATCTGGATTGGCTGAACTAGAACAGTGGTCTACTGAAGCAACAGAAGAGTATGCTGGCACAACTTTGGATGAACTCAAACATGTAACACAAGCCGTTAGATTCTTGGTTGTAGAGAAAAAGGATGAATTATCATATGATGGTCTTACAAATGAGCTATGCCCTGTTCTTAGTTCTCACCAGCTTTACAGAATATGTACACTTTACTGGGATGGAAATGAAAATGACAGTAGCCAAAGTGTATCATCTGAAGTCATCTCTAGTTTGAAGCTGCTAATGACAGATGGTGTAGAAGATGATAGTAAATCCTACATGTTAGAAGACAATTCAAGTATCCCTATTATTGTTGAGGAGATTTCTAGCTCCCTCAAAGATAAGACTACTTCAAAAGTAAAGCCTCCTGAAGAACTTCTTGAGAATGCAGGCTTCCAATTTTTACATGACTATTCTTAA 4722 0.392 MASSYCDWNWAAYQARFLGIPGERVAEECLIRTAQLSFVVGSHIWIEDPDEAWIEGEILESKGNEITVNCASGTKVISKSSHIYPKDPEFPPNGVDDMTRLAYLHEPGVLQNLHVRYEVNEIYTYTGNILIAVNPFQRLPHLYSRETMEKYKGAAFGEKSPNPFAIADSAYRKMINEETSQSILVSGESGAGKTESTKMLMCYLAYMGGRAANEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEDVEKYKLGNPRTFHYLNQSNCIELQGLDDSKEYLATRRAMDVVGINGNEQDAIFRIVAAVLHLGNIEFVKGDDEETDSSQPKDDKSRFHLKTAAELLMCDEKSLEDSFCKRVMVTRGDKITKSLDPVAASLSRDALAKIIYSRLFDWIVDKINNSIGQDPHSKNLIGVLDIYGFEILNFLCVDNDALVHIINFLLRKITLYKWFLCSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKMRHACFQDQPMKHLPKSCIKHLKTINGSASQSCLVTYQTDLFLDKNKDYVVPEHAALLNASKCNFVSGLFPPLPEETSKSTKFASVATQFKQQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENSNVLQQLRCGGVMEAIRISCAGYPTRKNFDEFIRRFSILEPKVLTSCPDEMTSCKMLLDKVNLKDYQIGKTKVFLRVGQMAQLDACRAEVLGRSATIIQRKVCTYLCQKHYNTLRMSAIQLQRVVRGQLARFHYEKMRREDASVKIQKNLRMHLSKTAYQALKASAVFIQTAMRGKTARNQLRYRKLTRAAVIIERHGRGYIARSHYKRLKKAAIFAQCSWRRTMARRELRKLRMAAKEAKALEAAKKELEKQVEELTKTQENEKLQSALHEMELQLKETQASLHEMESLLLKERQAPKTADTTPMQVIQSNGADNDIELISKLTAENEQLKGLVNSLEKKSTLEIPSNMTENEVINMLSSERELLKVSSLEQKINETERKYEECSKLSEERMNQIIETESKIIELKTSMQRLEEKVSDMETENQVLRQKSLSSSSSKKMSEKNPSQASTSASSGQTKTFGTDADSKVRTSHMERHLVCFYKKLLFHIPIILTESHFHVFDYCVQESIETLFKCIQKDLGFSEGKPVAAFTLYNCLLHWKCFEAEKTSIFDRLIQLIGSAIEDQDNNGCMAYWLSNTSALLFHLQRTLRVPTARKPPTPTSFFGRVTQGFRSSKSLSSGSFDVEHQVDAKYPALLFKQQLAAYVEKIYGILRENLKKDISPLISAFIQAHGKSDDNNHPAASWTAIVQCINRFLNIFKENHVHPVLVQKIFSQVFQHINAEIFNSLVSQRECCTFNNGQLIKSGLAELEQWSTEATEEYAGTTLDELKHVTQAVRFLVVEKKDELSYDGLTNELCPVLSSHQLYRICTLYWDGNENDSSQSVSSEVISSLKLLMTDGVEDDSKSYMLEDNSSIPIIVEEISSSLKDKTTSKVKPPEELLENAGFQFLHDYS* 1574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3220 1573 Gene3D - 42 86 IPR008989 GO:0003774|GO:0005524|GO:0051015
Amo10g3220 1573 Coils Coil 1043 1073 - -
Amo10g3220 1573 Pfam Myosin head (motor domain) 95 558 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo10g3220 1573 Pfam Myosin head (motor domain) 592 758 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo10g3220 1573 CDD MYSc_Myo11 107 758 IPR036018 -
Amo10g3220 1573 SMART MYSc_2a 87 771 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo10g3220 1573 Coils Coil 1003 1023 - -
Amo10g3220 1573 Gene3D Myosin VI head, motor domain, U50 subdomain 342 639 - -
Amo10g3220 1573 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 821 920 IPR027417 -
Amo10g3220 1573 Gene3D - 283 341 - -
Amo10g3220 1573 ProSiteProfiles Myosin motor domain profile. 93 770 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo10g3220 1573 Pfam IQ calmodulin-binding motif 797 813 IPR000048 GO:0005515
Amo10g3220 1573 Pfam DIL domain 1392 1494 IPR002710 -
Amo10g3220 1573 PANTHER MYOSIN 36 964 - -
Amo10g3220 1573 PANTHER MYOSIN 1034 1570 - -
Amo10g3220 1573 CDD MyosinXI_CBD 1187 1540 IPR037975 GO:0007015
Amo10g3220 1573 ProSiteProfiles Dilute domain profile. 1233 1518 IPR002710 -
Amo10g3220 1573 ProSiteProfiles IQ motif profile. 796 825 IPR000048 GO:0005515
Amo10g3220 1573 Coils Coil 905 972 - -
Amo10g3220 1573 Gene3D - 472 661 - -
Amo10g3220 1573 Coils Coil 1078 1112 - -
Amo10g3220 1573 ProSiteProfiles IQ motif profile. 892 921 IPR000048 GO:0005515
Amo10g3220 1573 PANTHER MYOSIN HEAVY CHAIN 36 964 - -
Amo10g3220 1573 PANTHER MYOSIN HEAVY CHAIN 1034 1570 - -
Amo10g3220 1573 ProSiteProfiles IQ motif profile. 821 847 IPR000048 GO:0005515
Amo10g3220 1573 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 39 88 IPR004009 GO:0003774|GO:0005524|GO:0016459
Amo10g3220 1573 SMART DIL_2 1391 1498 IPR002710 -
Amo10g3220 1573 Gene3D - 705 768 - -
Amo10g3220 1573 Gene3D - 869 921 - -
Amo10g3220 1573 Gene3D - 773 823 - -
Amo10g3220 1573 Gene3D - 824 868 - -
Amo10g3220 1573 ProSiteProfiles IQ motif profile. 844 873 IPR000048 GO:0005515
Amo10g3220 1573 SMART iq_5 843 865 IPR000048 GO:0005515
Amo10g3220 1573 SMART iq_5 891 913 IPR000048 GO:0005515
Amo10g3220 1573 SMART iq_5 868 890 IPR000048 GO:0005515
Amo10g3220 1573 SMART iq_5 820 842 IPR000048 GO:0005515
Amo10g3220 1573 SMART iq_5 772 794 IPR000048 GO:0005515
Amo10g3220 1573 SMART iq_5 795 817 IPR000048 GO:0005515
Amo10g3220 1573 Gene3D Kinesin motor domain 96 700 IPR036961 -
Amo10g3220 1573 PRINTS Myosin heavy chain signature 180 205 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo10g3220 1573 PRINTS Myosin heavy chain signature 227 254 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo10g3220 1573 PRINTS Myosin heavy chain signature 541 569 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo10g3220 1573 PRINTS Myosin heavy chain signature 123 142 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo10g3220 1573 PRINTS Myosin heavy chain signature 488 516 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo10g3220 1573 Pfam Myosin N-terminal SH3-like domain 41 81 IPR004009 GO:0003774|GO:0005524|GO:0016459
Amo10g3220 1573 MobiDBLite consensus disorder prediction 1097 1148 - -
Amo10g3220 1573 MobiDBLite consensus disorder prediction 1106 1146 - -
Amo10g3220 1573 ProSiteProfiles IQ motif profile. 869 895 IPR000048 GO:0005515
Amo10g3220 1573 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 822 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3220 Amo-Chr10 97935410 97944193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3220 40 1570 Myosins gene family AT5G43900 57.491 0.0 1776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3220 K10357 - gmx:100788123 2035.77