Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3205 ATGTTTCCGAAGGAGAATAGTAGTAACGGCTACCATAACCCGCCGCCGCCGCCGCCGCCGCCGGGAGTGGGAAACATTAACAGCCACAGAGAGCGAGCCCGTCGAGGCACGCGCAGGTCACGTGCTTCCCGAGACAGTATCAGCCTTAGGGTTTATGACCAGCAGCAGCAGCAGCAGCAGCAGCGAGCTCCTTGCACGGACTTCGACATGGCCTATTTCCATTCTTACGCTCACCTCGGTATTCACGAAGAGATGATAAAGGATCGCGTGAGGACTGAAACTTATAGAGAAGCAATCATGCGGCATCAGAGTTTTATTGCAGGCAAAGTTGTAGTTGACGTGGGATGTGGTACAGGAATCCTTGCAATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTATATGCAGTTGATGCCAGTGACATTGCCCTGCAGGCAAATGAAGTTGTGAAAGCAAATAATCTGTCTGATGTTATTGTTGTATTGCATGGAAGGGTTGAGGATGTTGAAATCAATGAACAGGTGGATGTTATTATTTCAGAATGGATGGGTTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTCATTACTGCTAGAGATCGCTGGCTCAAACCTGGGGGTCTTATCCTTCCTTCAAATGCAACGTTGTACATGGCTCCTGTCACACATTGTGACAGATACAGTGGAAGCATTGATTTCTGGCGCAATGTTTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAGTGTGCATTTGAAGAACCTTCTGTGGAGACAATTACCGGTGAAAATATTTTGACATGGCCACATGTGGTGAAATATATTGATTGTTATTCTGTTACCATTGGTGAGCTAGAAACTGTAACAACAAGATTTAAGTTCAATTCAATGATGCGAGCACCACTTCATGGTTTTGCATTTTGGTTTGATGTTGAATTTAATGGGCCTGCAATGCCACAAAGCAATTATCCTTCATCAACTTCATTTACTGATAATCATCTGGTGAATGGTAGTCAGAGGAAAAAGCGGATAAATCCAAATGAAGCATTGGTCCTATCCACTGCACCTGAGGACCCTCCAACACATTGGCAGCAGACGTTGATATACTTTTATGATCCGATAGAATTGGAACAAGATCAAGTAATTGAAGGTCTAGTGACATTGACACAAAGCAAAGAGAATGCTCGCTTTATGAATATTCACCTTGAGTATACTTCGGGAGGTCGATCACACATCAAAGAGTCTGTAATGAGATGA 1263 0.4394 MFPKENSSNGYHNPPPPPPPPGVGNINSHRERARRGTRRSRASRDSISLRVYDQQQQQQQQRAPCTDFDMAYFHSYAHLGIHEEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILAIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVIVVLHGRVEDVEINEQVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSNATLYMAPVTHCDRYSGSIDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENILTWPHVVKYIDCYSVTIGELETVTTRFKFNSMMRAPLHGFAFWFDVEFNGPAMPQSNYPSSTSFTDNHLVNGSQRKKRINPNEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQVIEGLVTLTQSKENARFMNIHLEYTSGGRSHIKESVMR* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3205 420 MobiDBLite consensus disorder prediction 47 63 - -
Amo10g3205 420 CDD AdoMet_MTases 111 210 - -
Amo10g3205 420 Pfam Ribosomal protein L11 methyltransferase (PrmA) 107 181 - -
Amo10g3205 420 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 69 420 IPR025799 GO:0016274|GO:0018216
Amo10g3205 420 MobiDBLite consensus disorder prediction 1 63 - -
Amo10g3205 420 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 21 417 IPR025799 GO:0016274|GO:0018216
Amo10g3205 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 75 410 IPR029063 -
Amo10g3205 420 PANTHER BNAC03G41340D PROTEIN 21 417 - -
Amo10g3205 420 MobiDBLite consensus disorder prediction 10 24 - -
Amo10g3205 420 Gene3D - 213 419 - -
Amo10g3205 420 Gene3D Vaccinia Virus protein VP39 66 211 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3205 Amo-Chr10 97732715 97745235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3205 72 420 C2H2 Transcription Factor Family AT3G12270 37.363 8.84e-67 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3205 K11437 - gmx:100809174 699.123