Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3177 ATGAGGATGAGTTGTAACGGATGCAGAGTGTTGAGGAAAGGGTGCAGCGAGGATTGTAWCATAAGACCGTGTTTGGAMTGGATCAAGAGCGCAGAGTCTCAAGCCAATGCTACTCTCTTCCTTGCTAAGTTCTATGGCCGCGCTGGTCTCATCAACCTCATCAACGCTGGCCCCAATCACCTTCGTCCTGCGGTTTTTCGTTCGTTATTATACGAGGCATGCGGGAGAATAGTGAACCCGATSTATGGATCGGTGGGTTTGTTGTGGTCGGGGAGCTGGCAGCTCTGCCAAGCCGCCGTCGAAGCGGTTTTGAAGGGACTGCCGATCACGCCGATAAATTCGGAGCTGGCGGAGAGCGGKCGMGGTCCACCTTTCAAGGCTCATGACATACGCCACGTGTCCAAGCCTWATAACAACACCGTAACCGRCGCGTCTCACGAAACTAAGCGAGTCAAGACTCGCTCCCGAATCAAGAAGCCCAAGGTGGCCGAGGTTGCGAAGCGCGCGTCGAGTCACGAGTCATCGCTGAGCCACGAACGGATGGAGGCGGTTGCTACGGCGGCGGAAGGAGAGAGCAAGGAGATCGAAAGTGACGTGTCGGTGGAGACGACTACGACTACGACTACGGTTCGGTTCCATGACGAACCGGATTCTGATGCAAAGGGGAGGGGTGGTTCGGCCGAAGTCTGCGGGAACGAGGTTGGGTTGGAGCTGACGCTGGGGTTTGAAACGGTGTCACGTGAGCATCATGACGTTGTGGTGCCAATGAAGAAGAGGAGAATTGATTTGAAGGATTTTTGTGGCGGGGTAAGTAGTGATAACGGTTCGTGCAAGATGGAGTTGGGACTTCAGTTCCAGGCTTTCAACGGTTCAGTTTTGACTTGA 885 0.539 MRMSCNGCRVLRKGCSEDCXIRPCLXWIKSAESQANATLFLAKFYGRAGLINLINAGPNHLRPAVFRSLLYEACGRIVNPXYGSVGLLWSGSWQLCQAAVEAVLKGLPITPINSELAESGRGPPFKAHDIRHVSKPXNNTVTXASHETKRVKTRSRIKKPKVAEVAKRASSHESSLSHERMEAVATAAEGESKEIESDVSVETTTTTTTVRFHDEPDSDAKGRGGSAEVCGNEVGLELTLGFETVSREHHDVVVPMKKRRIDLKDFCGGVSSDNGSCKMELGLQFQAFNGSVLT* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3177 294 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Amo10g3177 294 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Amo10g3177 294 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 284 - -
Amo10g3177 294 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3177 Amo-Chr10 97329968 97331023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3177 1 283 AS2 family AT3G02550 55.822 7.58e-100 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo10g3177 LOB 2.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3177 - - aprc:113867933 353.214