Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g3166 ATGTGTATTGTTCCTTTAAGAAGGCCGTGCTGCAGAATAGGTTTGGTTTTGGGTGAGGGTTATTCTGGTTTACCGTGGATTAATTTTTTGGATGTTGGAGCCAATTGGGCTTCCGGTTTCAAGCCCAACTGCATTTGGCTGATTCTTGACTTATATAAATGCAGATGGTCAATAATAGCATCTCAGTTGCCAGGAAGGACAGACAATGACATCAAGAACTATTGGAATACCAAGCTTACGAAAAAGATGATGCCAATTATGATGGACCCTTTAACAATGAACAATAATAATAATAAGCCTCATCCCCAAATTACCCTTTTGTCCATCCTCCGAAATTCATCATCAACACAACATTCTCCTTCTCCTCCATCTCCTCCACCATTCATATCAAACACAACCGCCACTAATAATAATAATGACACTTATTATTACTACCACCCTCATGAGTCCATTATTTCTTACTCATCATCAAGTGATCTTATCATCAATGCCAATAGTAGTTCTTCTACTTCTTCTGATTCTATCATCTTTCAATCTCAACAACAAGAATCTTATATGGATAATAACACCATTGATCATCAGAATTATCATCAAGAACCAGCTGAACAACTTGGATATTGTGGTGATGATTATTACTATGATTATGGTACCTTTGTGGACCATATAGTTGCAAATAATAATCATAATAATTACCACTATAGTGGGGTAGAAGATGCACAAAAGTTTATGCATTTTAATGGTGGCAGGGGTAATGTGGGGACAGAGAAACAAAGTAGTACCTTGTTGGAAGAAAATCCATTGGATAATTATGGAATAGATGAGACTAAAGAGCTTGTATTAAGCAACAATAACTTTTTGTTTGATCACAACTAA 873 0.3608 MCIVPLRRPCCRIGLVLGEGYSGLPWINFLDVGANWASGFKPNCIWLILDLYKCRWSIIASQLPGRTDNDIKNYWNTKLTKKMMPIMMDPLTMNNNNNKPHPQITLLSILRNSSSTQHSPSPPSPPPFISNTTATNNNNDTYYYYHPHESIISYSSSSDLIINANSSSSTSSDSIIFQSQQQESYMDNNTIDHQNYHQEPAEQLGYCGDDYYYDYGTFVDHIVANNNHNNYHYSGVEDAQKFMHFNGGRGNVGTEKQSSTLLEENPLDNYGIDETKELVLSNNNFLFDHN* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g3166 290 Gene3D - 43 105 - -
Amo10g3166 290 PANTHER OS09G0431300 PROTEIN 40 199 - -
Amo10g3166 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 83 IPR017930 -
Amo10g3166 290 MobiDBLite consensus disorder prediction 112 133 - -
Amo10g3166 290 ProSiteProfiles Myb-like domain profile. 48 79 IPR001005 -
Amo10g3166 290 CDD SANT 55 79 IPR001005 -
Amo10g3166 290 Pfam Myb-like DNA-binding domain 53 77 IPR001005 -
Amo10g3166 290 SUPERFAMILY Homeodomain-like 48 83 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g3166 Amo-Chr10 97250952 97253499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g3166 12 84 MYB Transcription Factor Family AT4G37780 50.000 3.51e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo10g3166 Myb_DNA-binding 2.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g3166 K09422 - gmx:778084 115.161